LOCUS AK294445 2961 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ57298 complete cds, highly similar to Rap guanine nucleotide exchange factor 4. ACCESSION AK294445 VERSION AK294445.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2961) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2961 /clone="BRAMY3006504" /clone_lib="BRAMY3" /db_xref="H-InvDB:HIT000489069" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="amygdala" CDS 126..2702 /codon_start=1 /note="highly similar to Rap guanine nucleotide exchange factor 4" /protein_id="BAH11769.1" /transl_table=1 /translation="MAGLLAPPYGVMETGSNNDRIPDKENTPLIEPHVPLRPANTITK VPSEKILRAGKILRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWMMQQTPCVHSR TQAVGMWQVLLEDGVLNHVDQEHHFQDKYLFYRFLDDEHEDAPLPTEEEKKECDEELQ DTMLLLSQMGPDAHMRMILRKPPGQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGV LIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVND APRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQDVLVLEKVPAGNRAS NQGNSQPQQKYTVMSGTPEKILEHFLETIRLEATLNEATDSVLNDFIMMHCVFMPNTQ LCPALVAHYHAQPSQGTEQEKMDYALNNKRRVIRLVLQWAAMYGDLLQEDDVSMAFLE EFYVSVSDDARMIAALKEQLPELEKIVKQISEDAKAPQKKHKVLLQQFNTGDERAQKR QPIRGSDEVLFKVYCMDHTYTTIRVPVATSVKEVISAVADKLGSGEGLIIVKMSSGGE KVVLKPNDVSVFTTLTINGRLFACPREQFDSLTPLPEQEGPTVGTVGTFELMSSKDLA YQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQFWVVTEICLCS QLSKRVQLLKKFIKIAAHCKEYKNLNSFFAIVMGLSNVAVSRLALTWEKLPSKFKKFY AEFESLMDPSRNHRAYRLTVAKLEPPLIPFMPLLIKDMTFTHEGNKTFIDNLVNFEKM RMIANTARTVRYYRSQPFNPDAAQANKNHQDVRSYVRQLNVIDNQRTLSQMSHRLEPR RP" BASE COUNT 875 a 668 c 675 g 743 t ORIGIN 1 agatagatat tttgtaagat tctagtcaat gtcagtattt aaactcctgg accatatgtg 61 gcttctctta gcagattttg caaaggaaac ttactccagt atgcaagact aaatatcgac 121 agtatatggc aggacttctg gctcctcctt atggtgttat ggaaacgggc tctaacaatg 181 acaggattcc tgacaaggag aacacacctc tcattgaacc tcacgttcct cttcgtcctg 241 ctaacaccat taccaaggtc ccttcagaga agatcctcag agctggaaaa attttacgaa 301 atgccattct ctctcgagca cctcacatga taagagatag aaaataccac ctaaagacat 361 acagacaatg ctgtgtggga actgaactgg tggactggat gatgcagcag acaccatgtg 421 ttcactcccg gactcaagct gttggcatgt ggcaagtcct gttagaagat ggtgttctca 481 accacgtgga ccaggagcac catttccaag acaaatattt attctatcga tttctggatg 541 atgagcacga ggatgcccct ttgcctactg aggaggagaa gaaggagtgt gatgaggagc 601 tccaggacac catgctgctg ctgtcacaga tgggccccga cgcccacatg aggatgatcc 661 ttcgcaaacc acctggccag aggactgtgg atgacctaga gattatctat gaggagcttc 721 ttcatattaa agccttatcc catctttcta ccacagtgaa acgagagtta gcaggtgttc 781 tcatttttga gtctcacgcc aaaggaggga ctgtgttgtt taaccagggg gaagaaggta 841 cctcctggta cattattcta aaaggatcag tgaatgtagt catttacggc aagggtgtgg 901 tctgcaccct gcatgaagga gatgacttcg gcaagttagc actagtgaat gatgccccac 961 gagctgcctc tatcgtctta cgagaagata actgccattt cttaagagta gacaaggagg 1021 atttcaaccg gatcctaagg gacgtggagg cgaatacagt cagacttaaa gaacatgacc 1081 aagatgtctt ggtgctggag aaggtcccag cagggaacag agcttctaat caaggaaact 1141 cacagcctca gcaaaagtat actgtgatgt caggaacacc tgaaaaaatt ttagagcatt 1201 ttctagaaac aatacgcctt gaggcaactt taaatgaagc aacagattct gttttaaatg 1261 actttattat gatgcactgt gtttttatgc caaataccca gctttgcccg gcactggtgg 1321 cccactacca cgcacagcct tcacaaggta cagaacagga gaaaatggat tatgccctca 1381 acaataagag gcgagtcatc cgcctggttc tacagtgggc tgccatgtat ggagacctcc 1441 tgcaagagga tgacgtgtct atggccttcc tggaggagtt ttatgtatct gtatcagatg 1501 atgcccggat gattgctgcc ctcaaggagc aactgccaga gttggagaag attgtcaagc 1561 aaatctcaga agatgcaaag gcaccacaaa agaagcacaa ggttcttttg caacagttca 1621 atacgggcga tgagagagcc cagaagcgcc agcctatccg cggctctgat gaagttctgt 1681 ttaaggtcta ttgcatggac cacacctaca caaccattcg ggtgccagtg gccacttcgg 1741 tgaaggaagt catcagtgca gttgccgaca agctgggctc cggggagggc ctgatcatag 1801 tcaagatgag ttccggagga gaaaaggtgg tgctcaaacc taatgatgtt tcagtattta 1861 cgacgctcac cattaatgga cgcctgtttg cttgcccgcg agagcaattc gattcactga 1921 ctcccttacc agaacaggaa ggcccaactg ttggaacagt gggaactttt gaactgatga 1981 gctccaaaga tttagcatac cagatgacaa tttatgattg ggaactcttc aactgcgtgc 2041 atgagctgga gctaatctat cacacatttg gaaggcataa ttttaaaaag accacagcaa 2101 acttggattt gttcctgagg agatttaatg aaattcagtt ttgggtcgtc actgagatct 2161 gcctttgttc tcagctcagc aagcgtgttc agctattaaa aaaatttatt aagatagcag 2221 cccactgtaa ggagtataaa aatctgaatt ccttttttgc catcgtcatg ggactaagta 2281 acgttgctgt gagccgcttg gcactaacgt gggagaaact gccaagcaag ttcaagaagt 2341 tctatgcgga gtttgaaagt ttaatggacc cttcaaggaa ccacagagcc tacaggctga 2401 cagtagctaa gctggaacct cctctcatcc ccttcatgcc tttgctcatt aaagatatga 2461 catttactca tgaggggaac aagacgttca ttgacaatct agtaaacttt gaaaaaatgc 2521 gcatgattgc aaatacggcc agaacagtga gatactacag gagccaaccc ttcaatcctg 2581 atgcagctca agctaataag aaccatcagg atgtccggag ttatgtacgg caattaaatg 2641 tgattgacaa ccagagaact ttatcacaga tgtcacacag attagagcct cgtcgaccat 2701 agacatttca aatgcccaaa gcaacagttt gtctccagtc cacaatcttt caaaaatgcc 2761 atttatgcta ctactgactg tattgccact agagaattct acaaaacaag caaaaacaca 2821 tcctgagaca cctcagggct gcattcagct taccagctac ctagcaagag aaggaattat 2881 ttgacatgcc taaagcttac acactctagc ttaggaatcc ccagtttgtg gctaccctgt 2941 ttcatttcca cttgtgccat c //