LOCUS AK294443 2163 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56431 complete cds, highly similar to
Conserved oligomeric Golgi complex component 6.
ACCESSION AK294443
VERSION AK294443.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2163)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2163
/clone="BRAMY3006088"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489067"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 2..2074
/codon_start=1
/note="highly similar to Conserved oligomeric Golgi
complex component 6"
/protein_id="BAG57684.1"
/transl_table=1
/translation="MRMRGRFAHAQYSRCLRGPCLAEVAAGGGTRSAMAEGSGEVVAV
SATGAANGLNNGAGGTSATTCNPLSRKLHKILETRLDNDKEMLEALKALSTFFVENSL
RTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKE
QTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITEDFFKA
LGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQESCD
VSPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALTRGGPGGTPRPIEMHS
HDPLRYVGDMLAWLHQATASEKEHLEALLKHVTTQGVEENIQEVVGHITEGVCRPLKV
RIEQVIVAEPGAVLLYKISNLLKFYHHTISGIVGNSATALLTTIEEMHLLSKKIFFNS
LSLHASKLMDKVELPPPDLGPSSALNQTLMLLREVLASHDSSVVPLDARQADFVQVLS
CVLDPLLQMCTVSASNLGTADMATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHL
DTLINEQASYVLTRVGLSYIYNTVQQHKPEQGSLANMPNLDSVTLKAAMVQFDRYLSA
PDNLLIPQLNFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPINEYKDPENILHRSP
QQVQTLLS"
BASE COUNT 657 a 446 c 484 g 576 t
ORIGIN
1 gatgcgcatg cgcggccgat ttgcacatgc gcaatactcg cgctgcctcc gtggtccctg
61 cctggctgag gtggcagcag ggggcgggac gcgcagcgct atggcagagg gcagcgggga
121 agtggtcgca gtgtctgcga ccggggctgc caacggcctc aacaatgggg caggcgggac
181 ctcggcgacg acctgcaacc cgctgtcgcg caagctgcat aagatcctgg agacgcggct
241 ggacaacgac aaggagatgt tagaagctct caaggcactt tcaacctttt ttgttgaaaa
301 tagtctgcgg actcgaagaa atttacgtgg agatattgaa cgtaaaagtt tagccatcaa
361 tgaagaattt gtaagcattt tcaaggaagt gaaggaggaa cttgaaagca taagcgaaga
421 tgttcaagca atgagcaact gttgtcaaga tatgacaagt cgcctacagg cagcaaagga
481 acagactcaa gatttaatag taaaaaccac taagcttcaa tctgaaagcc aaaaattaga
541 gataagagct caagttgcag atgccttctt atccaagttc caactgactt ctgatgaaat
601 gagtcttctc cgaggtacaa gagaaggacc cattactgag gattttttca aggcactggg
661 aagagtaaaa cagattcata atgatgtcaa agttctcttg cgtacaaatc aacaaacggc
721 aggtttagaa attatggaac agatggcctt acttcaagaa acggcttatg aaagacttta
781 ccgatgggct caaagtgaat gcagaacatt gacacaagaa tcatgtgacg tatctccagt
841 attgacacag gcaatggaag ccctgcagga cagacctgtc ttatataaat ataccttaga
901 tgaatttgga acagccagaa gaagtacagt tgttcgtgga tttattgatg cgctcacaag
961 agggggcccc ggaggtacac ctagaccaat tgaaatgcat tctcatgacc ctttgaggta
1021 tgtaggagat atgttggctt ggctccatca agctactgct tctgaaaagg aacaccttga
1081 agctctctta aagcatgtaa ctacacaagg tgttgaagaa aatattcaag aagttgttgg
1141 gcatatcact gaaggtgtgt gcaggcctct aaaggttcga attgagcaag taatagttgc
1201 tgaacctggg gcagttttat tatataaaat ttctaatctc ctcaaatttt atcaccatac
1261 aatcagtggt attgttggaa atagtgcaac tgcattattg actaccattg aagaaatgca
1321 tttgctaagc aaaaaaatat tcttcaatag cttgagtctt catgcaagta aattaatgga
1381 caaggttgaa ctcccaccac ctgatcttgg accaagttct gcactaaatc agacactcat
1441 gttgctgcgt gaagttttag catctcacga ttcttcagtt gtaccattag atgctcgtca
1501 agctgatttt gtgcaggttt tatcatgtgt cttggatcct ctcctacaga tgtgtactgt
1561 atcagccagc aatttaggca cagctgacat ggccactttc atggtcaatt cactatatat
1621 gatgaagaca acattagctc tatttgaatt cactgacaga cgtctggaaa tgctacagtt
1681 tcagatcgaa gcacatttgg acacacttat aaatgagcaa gcctcttatg ttttaactag
1741 ggtaggcttg agttacatct ataacactgt acagcaacat aaacctgaac agggctcttt
1801 agctaatatg cccaacctag attctgtgac actgaaggct gcaatggttc agtttgatcg
1861 ttatctgtca gccccagaca acctattgat accacagctg aactttcttc taagtgccac
1921 agtgaaagag cagatcgtaa aacaatctac agaattagtc tgcagagcct atggtgaagt
1981 gtatgcagcc gtgatgaatc caatcaatga atacaaagat ccagagaaca ttcttcaccg
2041 atcgccgcag caagtgcaga cgcttctttc ctgattatct tatttcattg tgttagcaaa
2101 atatgacctc cctaaaacac tgaaggttat tttttattct ttgaattttt actctataat
2161 ttg
//