LOCUS AK294419 2479 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61230 complete cds, highly similar to PHD
finger protein 14.
ACCESSION AK294419
VERSION AK294419.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2479)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2479
/clone="BRAMY3001639"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489043"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 520..2331
/codon_start=1
/note="highly similar to PHD finger protein 14"
/protein_id="BAG57668.1"
/transl_table=1
/translation="MIVQMTVILKLEMPQDSLILEKSQNWSSQKMDHILICCVCLGDN
SEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACKCGVSPSCEL
CPNQDGIFKETDAGRWVHIVCALYVPGVAFGDIDKLRPVTLTEMNYSKYGAKECSFCE
DPRFARTGVCISCDAGMCRAYFHVTCAQKEGLLSEAAAEEDIADPFFAYCKQHADRLD
RKWKRKNYLALQSYCKMSLQEREKQLSPEAQARINARLQQYRAKAELARSTRPQAWVP
REKLPRPLTSSASAIRKLMRKAELMGISTDIFPVDNSDTSSSVDGRRKHKQPALTADF
VNYYFERNMRMIQIQENMAEQKNIKDKLENEQEKLHVEYNKLCESLEELQNLNGKLRS
EGQGIWALLGRITGQKLNIPAILRAPKERKPSKKEGGTQKTSTLPAVLYSCGICKKNH
DQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQAGSSDMEADMAMETL
PDGTKRSRRQIKEPVKFVPQDVPPEPKKIPIRNTRTRGRKRSFVPEEEKHEERVPRER
RQRQSVLQKKPKAEDLRTECATCKGTGDNENLVRYPS"
BASE COUNT 723 a 507 c 627 g 622 t
ORIGIN
1 acttcctttt cagagctgta tccgggtcgc tgctttccct attgtctgag gcagccgccc
61 tcgcgctgtg caatttctgg tctttcgttg cttctggtcc aggctaataa agtttttctt
121 tctttaattt tttttcttct agttttaacg ggagaaatta actccccggg gccgccgggt
181 tgactgcgct gcctgggccg gaggtcttct ccggccaggg agcgctgtgg gaaggggctc
241 gagcggccag ggccaggcga ggccgggggg gcggggggtt aggggaccgc ggggctactc
301 ttgggagcgc ccctgtccgg ctggctgcgc gccggtttta aatagcatct ttcggacttg
361 tcttcgcggc cccagtcccc gacctcggcg ctgcctgggc tcctgcagcc tctccctaag
421 tcttctccaa acgaccacct cacggattcc ttatggatcg cagctccaag aggaggcagg
481 tgaagccttt ggcagcttct ctgctggaag ctcttgatta tgatagttca gatgacagtg
541 attttaaagt tggagatgcc tcaggactcg ctgattcttg agaagagtca aaactggagc
601 tctcaaaaaa tggaccatat tctgatttgc tgtgtttgtc tgggagataa tagtgaggac
661 gctgatgaaa taattcagtg tgacaattgt ggcattacag tccatgaagg ttgttatgga
721 gttgatggag agagtgactc tattatgagt tcagcttctg aaaactccac tgaaccttgg
781 ttttgtgatg cctgtaaatg tggtgtttct cctagctgtg aactgtgtcc taatcaggat
841 ggaattttca aggagacaga tgctggaaga tgggttcata ttgtttgtgc cctgtatgtt
901 cctggagtag cctttggaga tattgacaaa ttacgaccag taacactaac ggaaatgaac
961 tattccaaat atggtgccaa ggagtgtagc ttttgtgaag accctcgctt tgctagaact
1021 ggggtttgca ttagctgtga tgcagggatg tgcagagcct atttccatgt gacctgtgct
1081 caaaaggaag gtctgctttc agaggcagcg gcggaagagg atatagcaga tccattcttt
1141 gcttattgta agcaacatgc agataggtta gacagaaagt ggaagagaaa aaactacttg
1201 gctctacagt cctattgtaa aatgtctttg caagagagag agaagcaact atcaccagaa
1261 gcacaggcaa ggatcaatgc ccggcttcag cagtatcgtg ccaaagcaga actagctcga
1321 tctaccagac cccaggcctg ggttccaagg gaaaaattgc ccagaccact caccagcagt
1381 gcttcagcta ttcgtaaact tatgcggaaa gcagaactca tggggatcag tacagatatc
1441 tttccagtgg acaattcaga tactagttct agtgtggatg gaaggagaaa acataagcaa
1501 ccagctctca ctgcagattt tgtgaattat tattttgaga gaaatatgcg catgattcaa
1561 attcaggaaa atatggctga acaaaagaat ataaaagata aattagagaa tgaacaagaa
1621 aagcttcatg tagaatataa taagctatgt gaatctttag aagaactaca aaacctgaat
1681 ggaaaacttc gaagtgaagg acaaggaata tgggctttac taggcagaat cacagggcag
1741 aagttgaata taccggcaat tttgcgagca cccaaggaga gaaaaccaag taaaaaagaa
1801 ggaggcacac aaaagacatc tactcttcct gcagtacttt atagttgtgg gatttgtaag
1861 aagaaccatg atcagcatct tcttttattg tgtgatacct gtaaactaca ttaccatctt
1921 ggatgtctgg atcctcctct tacaaggatg ccaagaaaga ccaaaaacag ttattggcag
1981 tgctcggaat gtgaccaggc agggagcagt gacatggaag cagatatggc catggaaacc
2041 ctaccagatg gaaccaaacg atcaaggagg cagattaagg aaccagtgaa atttgttcca
2101 caggatgtgc caccagaacc caagaagatt ccgataagaa acacgagaac cagaggacga
2161 aaacgaagct tcgttcctga ggaagaaaaa catgaggaaa gagttcctag agagagaaga
2221 caaagacagt ctgtgttgca aaagaagccc aaggctgaag atttaagaac tgaatgtgca
2281 acttgcaagg gaactggaga caatgaaaat cttgtcagat acccttcatg agacccaact
2341 ctgccacagc tcatcctcgg aggcaatccc ggaaacctct tttataagtg tgattttaaa
2401 aatgtggatt aaactctcga tagagtacat aaagtaaagg agaacagcta tattgtcctt
2461 tctataagct tgtcactgc
//