LOCUS AK294417 3469 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50075 complete cds, highly similar to
Potassium voltage-gated channel subfamily H member 8.
ACCESSION AK294417
VERSION AK294417.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3469)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3469
/clone="BRAMY3000732"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000489041"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 218..1924
/codon_start=1
/note="highly similar to Potassium voltage-gated channel
subfamily H member 8"
/protein_id="BAH11759.1"
/transl_table=1
/translation="MHLNKEILQLSLFECASRGCLRSLSLHIKTSFCAPGEYLLRQGD
ALQAIYFVYSGSMEVLKDSMVLAILGKGDLIGANLSIKDQVIKTNADVKALTYCDLQC
IILKGLFEVLDLYPEYAHKFVEDIQHDLTYNLREGHESDVISRLSNKSMVSQSEPKGN
GNINKRLPSIVEDEEEEEEGEEEEAVSLSPICTRGSSSRNKKVGSNKAYLGLSLKQLA
SGTVPFHSPIRVSRSNSPKTKQEIDPPNHNKRKEKNLKLQLSTLNNAGPPDLSPRIVD
GIEDGNSSEESQTFDFGSERIRSEPRISPPLGDPEIGAAVLFIKAEETKQQINKLNSE
VTTLTQEVSQLGKDMRNVIQLLENVLSPQQPSRFCSLHSTSVCPSRESLQTRTSWSAH
QPCLHLQTGGAAYTQAQLCSSNITSDIWSVDPSSVGSSPQRTGAHEQNPADSELYHSP
SLDYSPSHYQVVQEGHLQFLRCISPHSDSTLTPLQSISATLSSSVCSSSETSLHLVLP
SRSEEGSFSQGTVSSFSLENLPGSWSQEGMASASTKPLENLPLEVVTSTAEVKDNKAI
NV"
BASE COUNT 1017 a 754 c 738 g 960 t
ORIGIN
1 attcacagtc actgaaaaat ctctccagga ttatacatac ttagatttcc tcttctgtat
61 gctggatggc caaacagcag gagacagtag gaagagcatc cctgctgtct tgcaaagtaa
121 atcagttaga ctacacttac cccaatttga tttcctcctt catcttctct gacagctttt
181 gaaagacttt ccagatgagc tgcgttctga catcactatg cacttgaaca aggagatctt
241 acagttgtcc ctttttgaat gtgccagccg gggctgcctc aggtctctgt ctctacacat
301 caaaacctct ttctgtgctc cgggggagta tctgctgcgt caaggggatg ctttgcaggc
361 catctacttt gtatactcgg gctccatgga agttcttaaa gacagcatgg tgctggctat
421 tcttgggaaa ggggatttaa ttggagcaaa tctatcaatt aaggaccaag tgatcaagac
481 caatgcagat gtaaaggctt taacctactg tgatctccag tgtatcatcc tcaaaggact
541 ctttgaagtg ctagaccttt acccagaata tgctcacaaa ttcgtggaag acattcagca
601 tgacctcaca tacaacctcc gagaaggtca tgagagtgat gtgatatcaa gactatcaaa
661 caaatctatg gtctcacagt cagagcccaa gggaaatggc aacatcaaca agcgactccc
721 atccattgtg gaagatgagg aagaggagga ggagggggag gaagaggagg cagtctccct
781 ctctcccatc tgcacaaggg gatcttcttc gcgcaacaag aaggttggaa gcaataaagc
841 ctacctgggc ttaagcttaa agcaactggc ctcgggaacg gtgccctttc actcgcctat
901 cagagtctcc aggtcaaatt cccccaaaac caagcaggaa attgaccccc ccaaccataa
961 taaaaggaaa gagaagaact tgaaattgca actttcaact ttgaataatg ctggaccccc
1021 agacctcagt ccaaggattg ttgatggaat tgaagatgga aacagcagtg aagaaagtca
1081 gacttttgat tttggctctg aacgaatcag atcagagccc agaatttctc ctcctcttgg
1141 agatccagag attggagctg ctgttctctt catcaaagca gaggagacca agcagcagat
1201 aaacaaactc aacagtgagg taacaacatt gactcaggaa gtttctcagt tgggtaaaga
1261 catgagaaat gtgatccagc ttctggaaaa cgttctgtca cctcagcagc catcacggtt
1321 ttgctctttg cacagcacct ctgtgtgtcc ctccagggag agcttacaga ccagaacgag
1381 ctggagtgca caccagcctt gcctacactt gcaaacaggc ggggctgctt atacccaagc
1441 acaactttgt agcagtaata tcacctcaga catttggagt gtggatccct cctctgtggg
1501 gagcagcccc caacgaactg gagctcatga gcaaaatcct gcagacagtg aactttatca
1561 ttctccaagc cttgattatt caccttccca ctaccaggtt gtccaagaag gtcatttgca
1621 atttttaagg tgcatctctc cacattcaga ctctacgttg acgcctctgc agtccatttc
1681 agcaactctc tcatcttctg tctgctcctc ttcggaaaca tctttgcacc tagttctccc
1741 aagcagatca gaggagggca gcttcagtca gggaactgtg agttccttca gtctggaaaa
1801 cttaccagga tcttggagcc aggaaggaat ggcatcagct tctacaaaac ctttggagaa
1861 ccttccactg gaagttgtca caagcacagc agaagtgaaa gataacaaag ccataaatgt
1921 atgatattag tgcccatgat gcagcagcta atttcaaacc taccactgca tgacagtttt
1981 agtttgcctt tttgcctctg gtgggcatga agactgagca aagctgggaa tcctgcagaa
2041 aagagtgtga ggagccaggg aaaggcagaa ccacctccat gctgtagcaa acaatttcta
2101 gatactagaa gcataataga aacatttttc tgtacaggta ttaaactact ggtctgtttg
2161 acagactttg gtaacaatcc aaagaccctg agggtctgag cagctagaag tcctagacaa
2221 agaacttgtg gatgactttt gtcccatgtg gcttttgtga agtatggcaa aggtttttca
2281 tgagtgcctg attgttattc ctgaacaata tccatagcac tgttggcctc aggagtgcac
2341 agctcctgct gatgtatttt tctttttgtg aaggcaaagg gacaattatc actgcatgtc
2401 atctcctaga caatcagtca aatagagctg gtggccagtg gttagctatt cgcacgttat
2461 ttgccatgta aatgaaaacg tctttattta tcaaaaaaac acagaggcta tttttatatc
2521 cttggtatga aatatgtatt taaactattt aaatatttat aaagaaatga atgttttctt
2581 ttcattttgg taaaaaaaaa gcttgctgtt ttaacaagaa atgcactact gttgtgtata
2641 gtagatcaaa aattatttat tactaagagg atgtagtttc caaaggaatc ccccattttt
2701 tctgcatgca gtttgcaaca aatgtattct catgcttctg gattataaaa gaaaagtgaa
2761 gtcatatttt gttaatgaaa taaaaacatg gactgagtgt caactacatg agctttggca
2821 tggggataga gaggctccat ctaggctctg ccaactcatg tcaatgacat gatttaaggt
2881 cgttgtgcca gcagaaatgt ctctcctcta ggtatcgtat tttgttgctc aagaatccaa
2941 aatgagtctg tggacatagg gcaatttggg gctcaaagtg agggagaaaa cctgggtgtg
3001 tcctttccca gtgcttttct tttacaagag gtagtagact agtggaaatc cccaaatgga
3061 gccaagactt ctgagctata acttgtggga gtaataccag cttgcaatgg gtcagcactt
3121 tacctttttt ctttaaggct cccaacaatg ctatacagcg cagttgtttc cattcctatt
3181 tttaataaat ctcaggggaa gcctcagaga ttacacagtt aggatgctga cacagtctag
3241 aatccataat gctccctaca tctcacacta acaggcaaat tcagatgctg ggattggcaa
3301 tgatttaagc accttcacta aagtcttatt ttatgtttta gaacagttac agtctaattg
3361 tcttggacat tttgggaaga tatattgggt tcacattctg gagttctctt tattttccac
3421 cacaaaaaat aatctgagaa ttgtatcatt aaaagtatct aaacacacc
//