LOCUS AK294388 1726 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50484 complete cds, highly similar to Pendrin.
ACCESSION AK294388
VERSION AK294388.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1726)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1726
/clone="BRAMY2043258"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000489012"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 397..1446
/codon_start=1
/note="highly similar to Pendrin"
/protein_id="BAH11752.1"
/transl_table=1
/translation="MIAILALGKLLEPLQKSVLAAVVIANLKGMFMQLCDIPRLWRQN
KIDAVIWVFTCIVSIILGLDLGLLAGLIFGLLTVVLRVQFPSWNGLGSIPSTDIYKST
KNYKNIEEPQGVKILRFSSPIFYGNVDGFKKCIKSTVGFDAIRVYNKRLKALRKIQKL
IKSGQLRATKNGIISDAVSTNNAFEPDEDIEDLEELDIPTKEIEIQVDWNSELPVKVN
VPKVPIHSLVLDCGAISFLDVVGVRSLRVIVKEFQRIDVNVYFASLQDYVIEKLEQCG
FFDDNIRKDTFFLTVHDAILYLQNQVKSQEGQGSILETITLIQDCKDTLELIETELTE
EELDVQDEAMRTLAS"
BASE COUNT 489 a 342 c 369 g 526 t
ORIGIN
1 tattgcctca ggctgaccca actataatct aaatataaat gatcaatttg ccaggtagag
61 caagtgcttt ctaattttct gtttatattt gctgtgtctg tctcccgtaa ctcagacctt
121 ttgcactaga cagtacttgt gctcaacaaa atcttcccag ttgtttcctc tctgattgct
181 ttgcttgtag ttccctgtct ccttttcttc tttgtttcag agcttctaat cttcatcttg
241 gctctgcccc agctgtctca acagagaatt cattggtcat ctaatcaaac gagagagtag
301 tccccacccc ctcagcctct ctcctaacta gtatggatct taggagagct atttttgcca
361 gcgaaggttg ctggcatcat ctctgctgcg attgtgatga tcgccattct tgccctgggg
421 aagcttctgg aacccttgca gaagtcggtc ttggcagctg ttgtaattgc caacctgaaa
481 gggatgttta tgcagctgtg tgacattcct cgtctgtgga gacagaataa gattgatgct
541 gttatctggg tgtttacgtg tatagtgtcc atcattctgg ggctggatct cggtttacta
601 gctggcctta tatttggact gttgactgtg gtcctgagag ttcagtttcc ttcttggaat
661 ggccttggaa gcatccctag cacagatatc tacaaaagta ccaagaatta caaaaacatt
721 gaagaacctc aaggagtgaa gattcttaga ttttccagtc ctattttcta tggcaatgtc
781 gatggtttta aaaaatgtat caagtccaca gttggatttg atgccattag agtatataat
841 aagaggctga aagcgctgag gaaaatacag aaactaataa aaagtggaca attaagagca
901 acaaagaatg gcatcataag tgatgctgtt tcaacaaata atgcttttga gcctgatgag
961 gatattgaag atctggagga acttgatatc ccaaccaagg aaatagagat tcaagtggat
1021 tggaactctg agcttccagt caaagtgaac gttcccaaag tgccaatcca tagccttgtg
1081 cttgactgtg gagctatatc tttcctggac gttgttggag tgagatcact gcgggtgatt
1141 gtcaaagaat tccaaagaat tgatgtgaat gtgtattttg catcacttca agattatgtg
1201 atagaaaagc tggagcaatg cgggttcttt gacgacaaca ttagaaagga cacattcttt
1261 ttgacggtcc atgatgctat actctatcta cagaaccaag tgaaatctca agagggtcaa
1321 ggttccattt tagaaacgat cactctcatt caggattgta aagataccct tgaattaata
1381 gaaacagagc tgacggaaga agaacttgat gtccaggatg aggctatgcg tacacttgca
1441 tcctgaaagt gggttcggga ggtctctatg agcaaggaat acaagacaaa acttcctcaa
1501 tgcattgact atttcttcag actcaaaaca ctcattcttt tttctattaa gccattgaaa
1561 gagaagcact aagactgctt ctaggcttta tttataaaat aaacacctta tccctaacat
1621 gggcaaaatg gctagaatta ttcagacgat ttggcagcgt ccagggtaag ctggtgttat
1681 aatacgctgc tgatctacat cacagatttg ctaataatgt tcacgt
//