LOCUS AK294386 2545 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59318 complete cds, highly similar to SH2
domain-containing protein 3C.
ACCESSION AK294386
VERSION AK294386.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2545)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2545
/clone="BRAMY2043003"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000489010"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 597..2117
/codon_start=1
/note="highly similar to SH2 domain-containing protein 3C"
/protein_id="BAG57643.1"
/transl_table=1
/translation="MKRRSVTMTDGLTADKVTRSDGCPTSTSLPRPRDSIRSCALSMD
QIPDLHSPMSPISESPSSPAYSTVTRVHAAPAAPSATALPASPVARRSSEPQLCPGSA
PKTHGESDKGPHTSPSHTLGKASPSPSLSSYSDPDTGHYCQLQPPVRGSREWAATETS
SRQARSYGERLKELSENGAPEGDWGKTFTVPIVEVTSSFNPATFQSLLIPRDNRPLEV
GLLRKVKELLAEVDARTLARHVTKVDCLVARILGVTKEMQTLMGVRWGMELLTLPHGR
QLRLDLLERFHTMSIMLAVDILGCTGSAEERAALLHKTIQLAAELRGTMGNMFSFAAV
MGALDMAQISRLEQTWVTLRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLSNTTFPHV
LPLITLLECDSAPPEGPEPWGSTEHGVEVVLAHLEAARTVAHHGGLYHTNAEVKLQGF
QARPELLEVFSTEFQMRLLWGSQGASSSQARRYEKFDKVLTALSHKLEPAVRSSEL"
BASE COUNT 524 a 845 c 715 g 461 t
ORIGIN
1 acacaagttg tagatggcct tcagatatcc aaggggaggc gtccaggagg gctgctggag
61 agccagaggc tggcagcgac tatgtgaagt tctccaagga gaagtacatc ctggactcat
121 cgccagagaa actccacaag gaattggagg aggagctcaa actcagcagc acggatctcc
181 gcagccatgc ctggtaccat ggccgcatcc cccgagaggt ctcggagacc ttggtacaac
241 gcaacggcga cttcctcatc cgggactcac tcaccagcct gggcgactat gtgctcacgt
301 gccgctggcg caaccaggcc ttgcacttca agatcaacaa ggtggtggtg aaggcaggcg
361 agagctacac acacatccag tacctgtttg agcaggagag ctttgaccac gtgcccgccc
421 tcgtgcgcta tcatgtgggc agccgcaagg ctgtgtcaga gcagagtggt gccatcatct
481 actgcccggt gaaccgcacc ttcccactgc gctacctcga ggccagctat ggcctgggac
541 aggggagtag caagcctgct agccccgtca gcccctcagg ccccaagggc agccacatga
601 agcggcgcag cgtcaccatg accgatgggc tcactgctga caaggtcacc cgcagcgatg
661 gctgccccac cagtacgtcg ctgccccgcc ctcgggactc catccgcagc tgtgccctca
721 gcatggacca gatcccagac ctgcactcac ccatgtcgcc catctccgag agccctagct
781 cccctgccta cagcactgta acccgtgtcc atgccgcccc tgcagcccct tctgccacag
841 cattgcctgc ctcccctgtc gcccgccgtt ccagtgagcc ccagctgtgt cccggaagtg
901 ccccaaagac ccatggggag tcagacaagg gcccccacac cagcccctcc cacacccttg
961 gcaaggcctc cccgtcacca tcactcagca gctacagtga cccggacact ggccactact
1021 gccagctcca gcctcccgtg cgtggcagcc gagagtgggc agcgactgag acctccagcc
1081 ggcaggccag gagctatggg gagaggctaa aggaactgtc agaaaatggg gcccctgaag
1141 gggactgggg caagaccttc acagtcccca tcgtggaagt cacttcttcc ttcaacccgg
1201 ccaccttcca gtcactactg atccccaggg ataaccggcc actggaggtg ggccttctgc
1261 gcaaggtcaa ggagctgctg gcagaagtgg atgcccggac gctggcccgg catgtcacca
1321 aggtggactg cctggttgct aggatactgg gcgttaccaa ggagatgcag accctaatgg
1381 gagtccgctg gggcatggaa ctgctcaccc tcccccatgg ccggcagcta cgcctagacc
1441 tgctggaaag gttccacacc atgtccatca tgctggccgt ggacatcctg ggctgcaccg
1501 gctctgcgga ggagcgggca gcgctgctgc acaagaccat tcagctggcg gccgagctgc
1561 gggggactat gggcaacatg ttcagcttcg cggcggtcat gggtgccctg gacatggctc
1621 agatttctcg gctggagcag acatgggtga ccctgcggca gcgacacaca gagggtgcca
1681 tcctgtacga gaagaagctc aagccttttc tcaagagcct caacgagggc aaagaaggcc
1741 cgccgctgag caacaccacg tttcctcatg tgctgcccct catcaccctg ctggagtgtg
1801 actcggcccc accagagggc cctgagccct ggggcagcac ggagcacggc gtggaggtgg
1861 tgctggctca cctggaggcc gcccgcacag tggcacacca cggaggcctg taccacacca
1921 atgctgaagt caagctgcag gggttccagg cccggccgga gctcctggag gtgttcagca
1981 cggagttcca gatgcgcctt ctctggggca gtcagggtgc cagcagcagc caggcccggc
2041 gctatgagaa gttcgacaag gtcctcactg ccctgtccca caagctggaa cctgctgtcc
2101 gctccagcga gctgtgaccc cagggacatt tcccctctgc agctgcggac agcgtcaggg
2161 gcagaggggc acacaacttt ccccagagca ccccaaggac actgtgatca acccgagaat
2221 gttctgggtt caactcaagc atctcccttg cacctccagg gtcctgcgtg gactctgggt
2281 tccatcccac ctgctacatg ctcaccaggt ctccattgag gaagaacagg aacgccggtt
2341 cccccaccag cttttgctgc tccccttcct gctggggttc cctgttttcg agccatggga
2401 ggcaggctgc tcacgcctcc tcactctctg tctgtccctc accaacacca aggcctccat
2461 ctcactgtaa ataagtctct gttctgtaaa tagatgtaca gaagccatgt tatttctttc
2521 atataataaa cttttatgac tcttt
//