LOCUS AK294362 1235 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ58486 complete cds, highly similar to Alpha-2
catenin.
ACCESSION AK294362
VERSION AK294362.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1235)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1235
/clone="BRAMY2039223"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000488986"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 258..962
/codon_start=1
/note="highly similar to Alpha-2 catenin"
/protein_id="BAH11745.1"
/transl_table=1
/translation="MAQLPQEEKAKIAEQVEIFHQEKSKLDAEVAKWDDSGNDIIVLA
KQMCMIMMEMTDFTRGKGPLKNTSDVINAVKKIAEAGSRMDKLARAVADQCPDSACKQ
DLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGLDSATSLIQAAKNLMNAVVLT
VKASYVASTKYQKVYGTAAVNSPVVSWKMKAPEKKPLVKREKPEEFQTRVRRGSQKKH
ISPVQALSEFKAMDSF"
BASE COUNT 338 a 262 c 314 g 321 t
ORIGIN
1 attgccagtg cgcacgtagc tttggatatc tctgtatttt tcatatatgg gagtgggacg
61 gggactttgg ggagcttatc agcctgtgct cgtggcctcc ctggaatgga gaaagacgtg
121 ctttccggaa tggcagggta gctcataagc ctttgcaggg tctggctctg ccatccgcag
181 aaggcagagt caacatacgg tctgtacttc ctttgtcacc gtcactcacg ctttttctgt
241 aacccacgca ggccatcatg gcgcaactac cgcaggagga gaaggcaaaa atagctgagc
301 aggtggagat attccatcaa gagaaaagca agctggatgc agaagtggcc aaatgggacg
361 acagcggcaa tgatatcatt gtactggcca agcagatgtg tatgatcatg atggaaatga
421 cagacttcac aagaggcaaa ggcccattga aaaatacatc tgatgtcatt aatgctgtca
481 agaaaattgc cgaagcaggt tctcgaatgg acaaattagc tcgtgctgtg gctgatcagt
541 gtcctgattc agcatgtaag caggatttat tagcctacct tcaacgaatt gccttgtatt
601 gccatcagct taatatctgc agcaaggtga aggcagaagt gcagaatctg ggaggagagc
661 tcattgtgtc agggctggac agtgccacat cgcttatcca ggcagctaaa aacctgatga
721 atgctgttgt cctcacggtg aaagcatcct atgtggcctc aaccaaatac cagaaggtct
781 atgggacagc agctgtcaac tcacctgttg tgtcttggaa gatgaaggct ccagagaaga
841 agccccttgt gaagagagaa aagcctgaag aattccagac acgagttcga cgaggttctc
901 agaagaaaca catttcgcct gtacaggctt taagtgaatt caaagcaatg gattccttct
961 aggacgatag gttttaacaa gaaagctttt tctttctttt ctttctttct ttttcttttt
1021 aattccattt ttgtatgcat acctgccagc tcgtatgcct ctggcatggg gaaattaagg
1081 gaacagtgtc tgtttgcatg taagatgaga tgagatcaat actactgatc catctgtagc
1141 ctgggaagga gacaggacat tcctgtacta aggtggcaca gagctgtcct ttgcaacatt
1201 ctcataaaat tgggcacaga gttcgcattg gcgca
//