LOCUS AK294338 2085 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57104 complete cds, highly similar to Zinc
finger protein 40.
ACCESSION AK294338
VERSION AK294338.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2085)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2085
/clone="BRAMY2034565"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000488962"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 220..1971
/codon_start=1
/note="highly similar to Zinc finger protein 40"
/protein_id="BAG57608.1"
/transl_table=1
/translation="MLKKHIRTHTDVRPYHCTYCNFSFKTKDEKQRFSYERSGYDLEE
SDAPDEDDNENEDDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTDEDVRITDC
FSGVHTDPMDVLPRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDTIPSVDTS
RSPCHQMSVDYPESEEILRSSMAGKAVAITQSPSSVRLPPAAAEHSPQTAAGTPSVAS
PHPDPQEQKQQITLQPTPGLPSPHTHLFSHLPLHSQQQSRTPYNMVPVGGIHVVPAGL
TYSTFVPLQAGPVQLTIPAVSVVHRTLGTHRNTVTEVSGTTNPAGVAELSSVVPCIPI
GQIRVPGLQNLSTPGLQSLPSLSMETVNIVGLANTNMAPQVHPPGLALNAVGLQVLTA
NPSSQSSPAPQAHIPGLQILNIALPTLIPSVSQVAVDAQGAPEMPASQSKACETQPKQ
TSVASANQVSRTESPQGLPTVQRENAKKVLNPPAPAGDHARLDGLSKMDTEKAASANH
VKPKPELTSIQGQPASTSQPLLKAHSEVFTKPSGQQTLSPDRQVPRPTALPRRQPTVH
FSDVSSDDDEDRLVIAT"
BASE COUNT 583 a 575 c 458 g 469 t
ORIGIN
1 ttgcacttgc tctccttaat tcaaaacaga acactggaaa atcactatac tgtcaagcaa
61 taactaccca ttccaagtca gacttattgg tctattcaag caagtggaaa agcagcttaa
121 gcaagatata agtcaaatga agagtatgta tatgtccgag gcaggggaag aggaaaatac
181 atttgtgaag aatgtggaat acgttgtaag aaacctagca tgttaaagaa acacatacga
241 acccatacag atgtccgccc ctaccactgc acttactgta acttctcctt taagactaaa
301 gatgaaaaac agagattcag ttatgagcga tctggatatg atcttgaaga atctgatgcc
361 ccagatgagg atgacaatga aaatgaagac gatgatgagg acagccaggc tgaatcagtc
421 ctgtcagcca caccctcagt cacagctagc ccgcagcacc ttccatctag aagtagcctt
481 caggaccctg tgagtactga cgaggatgtc aggatcaccg attgcttttc tggggtacac
541 acggacccaa tggacgttct gcccagggcg ctgctcacca gaatgactgt cctgagcaca
601 gcacagtctg actacaatag gaagacactc tctccgggga aggccaggca gcgtgctgcg
661 agagatgaaa acgacacaat tccgtctgta gacacttcca ggtccccgtg tcatcagatg
721 tctgtggact accctgagtc agaagaaatt ctgagaagtt ctatggcagg aaaagctgtt
781 gctataacac agagcccatc atctgtaaga cttcctcctg ctgcagctga gcacagcccc
841 cagacagcag cggggacgcc ttctgtggcc tcaccacatc ctgaccctca agaacagaag
901 cagcaaataa ctctacagcc gactccaggc ttgccttctc cccacactca tttgtttagc
961 caccttcctt tgcattccca gcagcaatcg aggacacctt ataatatggt tccagttggg
1021 gggatccatg tggtacctgc tggcctcaca tactccacgt ttgtgcccct tcaggctgga
1081 ccagtgcagc tcacgatccc tgctgtcagt gtcgttcaca gaactttggg tactcatagg
1141 aatacggtca cagaagtgtc tggcactaca aaccctgctg gagtggctga attaagcagt
1201 gttgtgccat gtattcctat cggccaaatc cgcgtgccag gccttcagaa cctaagtacc
1261 ccaggcttgc agtcactccc ctcgttaagc atggaaaccg tcaatattgt aggcctagcc
1321 aatacaaata tggccccaca agtccatcca ccaggactgg ctctgaatgc tgtcggactg
1381 caggttctga ctgcaaaccc ttcatcacaa agcagccccg cccctcaggc acacattcca
1441 ggtctccaga tcttgaacat agcattgccc accttaatcc cctcagtcag tcaagtagcc
1501 gttgatgcac agggagctcc agaaatgcca gcttcccaaa gcaaagcatg cgagacacaa
1561 cccaagcaga cttctgtagc cagcgcaaac caggtcagca ggaccgagtc tcctcagggg
1621 ttacctacag tccagcggga aaatgcaaaa aaagttctga atccacctgc ccctgcaggt
1681 gaccatgcaa ggcttgatgg cctgagtaaa atggacacag agaaggctgc ctcggcaaat
1741 cacgtgaagc ccaagcctga actcacttcc atacagggcc aaccagcgtc cacgtcacaa
1801 cctctgctga aggcacattc tgaagttttt acaaagccct caggccagca gactctctct
1861 ccagacagac aggttcccag gcccacagca ctaccgcgga ggcagcccac tgtgcacttc
1921 agcgacgtga gcagcgatga tgacgaggac aggcttgtga tagcaacctg atggatttta
1981 ttttttattt gctttttttt tatataacac ttaaaggttt ctttgaaaac cctcctttcc
2041 ttaaagcaca tttttctgac ataaactcat gactaatctt tgtgc
//