LOCUS AK294284 2832 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57270 complete cds, highly similar to
Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.1.2.15).
ACCESSION AK294284
VERSION AK294284.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2832)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2832
/clone="BRAMY2022385"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000488908"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 109..2535
/codon_start=1
/note="highly similar to Ubiquitin carboxyl-terminal
hydrolase 16 (EC 3.1.2.15)"
/protein_id="BAG57569.1"
/transl_table=1
/translation="MGSVAVEPVCRHIRKGLEQGNLKKALVNVEWNICQDCKTDNKVK
DKAEEETEEKPSVWLCLKCGHQGCGRNSQEQHALKHYLTPRSEPHCLVLSLDNWSVWC
YVCDNEVQYCSSNQLGQVVDYVRKHASITTPKPEKDNGNIELENKKLEKESKNEQERE
KKENMAKENPPMNSPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTI
VKIEPPDLALTEPLEINLEPPGPLTLAMSQFLNEMQETKKGVVTPKELFSQVCKKAVR
FKGYQQQDSQELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKK
SMPSFVDRIFGGELTSMIMCDQCRTVSLVHESFLDLSLPVLDDQSGKKSVNDKNLKKT
VEDEDQDSEEEKDNDSYIKERSDIPSGTSKHLQKKAKKQAKKQAKNQRRQQKIQGKVL
HLNDICTIDHPEDSEYEAEMSLQGEVNIKSNHISQEGVMHKEYCVNQKDLNGQAKMIE
SVTDNQKSTEEVDMKNINMDNDLEVLTSSPTRNLNGAYLTEGSNGEVDISNGFKNLNL
NAALHPDEINIEILNDSHTPGTKVYEVVNEDPETAFCTLANREVFNTDECSIQHCLYQ
FTRNEKLRDANKLLCEVCTRRQCNGPKANIKGERKHVYTNAKKQMLISLAPPVLTLHL
KRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEENTRVLYSLYGVVEHSGTMR
SGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHISDTHVQAVPTTKVLNSQ
AYLLFYERIL"
BASE COUNT 1016 a 482 c 592 g 742 t
ORIGIN
1 attgctttcc aggggtcact ctggcttcga ctccgtcgct ctcaattcgt caccaggagg
61 aagacggagc tggctgccca gcccaaaggc ccatgagggg atgcagttat gggctctgtc
121 gccgtggaac ctgtgtgcag acacattaga aaaggattgg aacaaggtaa tttgaaaaag
181 gctttagtga atgtggaatg gaatatctgc caagactgta agactgacaa taaagtgaaa
241 gataaagctg aagaagaaac agaagaaaag ccttcagttt ggctgtgtct taaatgtggc
301 catcagggct gtggcagaaa ttctcaggag cagcatgcct tgaagcacta tctgacgcca
361 agatctgaac ctcactgtct ggttcttagt ttggacaact ggagtgtatg gtgttacgta
421 tgtgataatg aggtccagta ttgtagttca aaccagttgg gtcaagtggt tgattatgtc
481 agaaaacatg ccagcattac aactccaaag ccagagaaag ataatggaaa tattgaactt
541 gaaaataaaa aattagaaaa agagagtaag aatgaacaag agagagaaaa gaaggaaaac
601 atggctaaag agaatcctcc catgaattct ccttgccaaa taaccgtgaa aggactcagt
661 aatttgggaa acacatgttt cttcaatgca gttatgcaga acttgtcaca aacaccagtg
721 cttagagaac tactaaaaga agtgaaaatg tctggaacaa ttgtaaaaat tgaaccacct
781 gatttggcat taacagaacc attagaaata aaccttgagc ctccaggccc tcttacttta
841 gccatgagcc agtttcttaa tgagatgcaa gagaccaaaa agggggttgt gacaccgaaa
901 gaactctttt ctcaggtctg taaaaaagca gtgcggttta aaggctatca gcagcaagac
961 agccaggagc tgcttcgcta cttattggat gggatgagag cagaagaaca ccaaagagtg
1021 agtaaaggaa tacttaaagc atttggtaat tctactgaaa agttggatga agaactaaaa
1081 aataaagtta aagattatga gaagaaaaaa tcaatgccaa gttttgttga ccgcatcttt
1141 ggtggtgaac taactagtat gatcatgtgt gatcaatgca gaactgtctc cttggttcat
1201 gaatctttcc ttgatttgtc cctcccagtt ttagatgatc agagtggtaa gaaaagtgta
1261 aatgataaaa atctgaaaaa gacagtggag gatgaagatc aagatagtga ggaagaaaaa
1321 gataacgaca gttacataaa agagagaagt gatattcctt ctggaacaag taagcactta
1381 cagaaaaaag caaagaaaca agccaaaaag caagccaaga accaacgaag acaacaaaaa
1441 attcaaggaa aagttcttca tttaaatgat atttgtacta ttgaccatcc tgaagacagt
1501 gaatatgaag ctgaaatgtc acttcaagga gaagtaaata ttaaatccaa ccatatttca
1561 caagagggtg ttatgcataa agaatattgt gtcaaccaga aagatttgaa tggccaagca
1621 aaaatgatcg aaagtgtaac tgacaatcaa aaatccacag aggaagtaga tatgaaaaat
1681 atcaacatgg ataatgatct ggaggtttta acatcttctc ccactaggaa tttaaatggt
1741 gcctacctaa cggaagggag caatggagaa gtggacattt ccaatggttt caaaaaccta
1801 aatttgaatg ctgctcttca tcctgatgaa ataaatatag agattctgaa tgatagtcat
1861 actcctggaa caaaggtgta tgaggttgta aatgaagatc cagaaactgc tttctgtact
1921 cttgcaaaca gggaagtttt caatactgat gagtgttcaa tccaacattg tttatatcag
1981 ttcacccgta atgagaaact tcgagatgcg aataaactgc tttgtgaagt atgcacacgg
2041 agacagtgta atggaccaaa ggcaaatata aaaggtgaaa ggaagcatgt ttacaccaat
2101 gccaaaaagc agatgctaat ttctcttgct cctcctgttc ttactcttca tttaaagaga
2161 tttcagcagg ctggttttaa cctacgcaaa gttaacaaac acataaagtt tccggaaatc
2221 ttagatttgg ctcctttttg cacccttaaa tgtaagaatg ttgcagaaga aaatacaagg
2281 gtactctatt ccttatatgg agttgttgaa cacagtggta ctatgaggtc ggggcattac
2341 actgcctatg ccaaggcaag aaccgcaaat agtcatctct ctaatcttgt tcttcacggt
2401 gatattccac aagattttga aatggaatca aaagggcagt ggtttcacat cagcgacaca
2461 catgtgcaag ctgtgcctac aactaaagta ctaaactcac aagcgtacct cctattttat
2521 gagagaatac tgtaataata tcaaaagcac tttttctgga aacacattta tggcttttat
2581 aatggctgaa ataacgataa aaaaagacta attaaaatca tgttcactta acattaaata
2641 catgccagaa gaaatcatgt ttatttaaat attgaaggga aaaataccta aaaatgtaca
2701 aaggttttat attgtcatag tggtttttat tcctgctttg tttctggaaa ggaaatcctg
2761 aattacttaa gtactttgtg tttaatatat ctgggtgatg gatcacaaca catcaataaa
2821 ctgacttacc ct
//