LOCUS AK294281 2166 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58810 complete cds, highly similar to
Contactin-associated protein-like 3 precursor.
ACCESSION AK294281
VERSION AK294281.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2166)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2166
/clone="BRAMY2021791"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000488905"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 32..1990
/codon_start=1
/note="highly similar to Contactin-associated
protein-like 3 precursor"
/protein_id="BAG57566.1"
/transl_table=1
/translation="MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSF
SSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGS
SDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPL
AWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSN
GILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVL
IELLDTQVNFTVDKHTHHFQAKGDSSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLE
NLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKV
SVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLND
GQWHSVSFSAKWSHMNVVVDDDTAVQPLVAVLIDSGDTYYFGALYEQSCEAHKHRGNP
SGLYYIDADGSGPLGPFLVYCNMTDAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYA
AGAGQLRSAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTYWGVSLPD
AQKCTCGLEGNCIDSQYYCNCDAGRNEW"
BASE COUNT 529 a 521 c 578 g 538 t
ORIGIN
1 ccgggtctca gggcgcctgg ctgaagtgag catggcttca gtggcctggg ccgtcctcaa
61 ggtgctgctg cttctcccca ctcagacttg gagccccgtg ggagcaggaa atccacctga
121 ctgtgatgcc ccactggcct ctgccttgcc taggtcatcc ttcagcagct cctcagagct
181 gtccagcagc cacggcccgg ggttttcaag gcttaatcga agagatggag ctggtggctg
241 gactccactt gtgtcaaata aataccaatg gctgcaaatt gaccttggag agagaatgga
301 ggtcactgct gtcgccaccc aaggaggata tgggagctct gactgggtga ccagctacct
361 cctgatgttc agtgatggtg ggagaaactg gaagcagtat cgccgagaag aaagcatctg
421 gggttttcca ggaaacacaa acgcagacag tgtggtgcac tacagactcc agcctccctt
481 tgaagccagg ttcctgcgct ttctcccttt agcctggaac cctaggggca ggattgggat
541 gcggatcgaa gtgtacggat gtgcatataa atctgaggtg gtttattttg atggacaaag
601 tgctctgctg tatagacttg ataaaaaacc tttaaaacca ataagagacg ttatttcttt
661 gaaatttaaa gccatgcaga gcaatggaat tctacttcac agagaaggac aacatggaaa
721 tcacattact ctggaattaa ttaaaggaaa gcttgtcttt tttcttaatt caggcaatgc
781 taagctgcct tccactattg ctcctgtgac cctcaccctg ggcagcctgc tggacgacca
841 gcactggcat tccgtcctca tcgagctcct cgacacgcag gtcaacttca ccgtggacaa
901 acacactcat catttccaag caaagggaga ttccagttac ttggatctta attttgagat
961 cagctttggg ggaattccga cacccggaag atcgcgggca ttcagacgta aaagctttca
1021 tgggtgttta gaaaatcttt attataatgg agtggatgtt accgaattag ccaagaaaca
1081 caaaccacag atcctcatga tgggaaatgt gtccttctca tgtccacagc cacagactgt
1141 ccctgtgact tttctgagct ccaggagtta tctggctctg ccaggcaact ctggggagga
1201 caaagtgtct gtcacttttc aatttcgaac gtggaacaga gcaggacatt tgcttttcgg
1261 cgaacttcga cgtggttcag ggagtttcgt cctctttctt aaggatggca agctcaaact
1321 gagtctcttc cagccgggac agtcaccaag gaatgtcaca gcaggtgctg gattaaacga
1381 tgggcagtgg cactctgtgt ccttctctgc caagtggagc catatgaatg tggtggtgga
1441 cgatgacaca gctgttcagc ccctggtggc tgtgctcatt gattcaggtg acacctatta
1501 ttttggagct ctctacgagc agtcttgtga agcccacaag caccgaggga acccgtctgg
1561 gctttactat attgatgcag atggaagtgg ccccctggga ccatttcttg tgtactgcaa
1621 tatgacagac gccgcgtgga cggtggtgca gcacggtggc cccgacgcgg tgaccctccg
1681 aggtgccccc agcgggcacc cgcgctcggc tgtgtccttc gcgtacgcag cgggcgcggg
1741 gcagctgcgg tccgcggtga acctggcgga gcgctgcgag cagcggctgg ctctgcgctg
1801 cgggacggcg cggcgcccgg actcacgaga tggaacccca ctgagctggt gggttggaag
1861 aaccaatgaa acacacacct actggggagt ttctctgcct gatgctcaaa agtgtacttg
1921 tggattagag gggaactgca ttgattctca gtattactgc aactgtgatg ctggccggaa
1981 tgaatggtga tttccacatg atttccctgc acaaaaatgt ggtttttatt ctttaattat
2041 gcatagttaa ttaaatgtca gacaagctgg tacaataagg taactaaagt atgttcaagc
2101 aagctgaaat acaagttttg atgaaatatg atcagttaat ctaaggatta aattttatga
2161 ccaaag
//