LOCUS AK294267 2645 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54647 partial cds, highly similar to
Liprin-beta-1.
ACCESSION AK294267
VERSION AK294267.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2645)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2645
/clone="BRAMY2019324"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000488891"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 414..>2645
/codon_start=1
/note="highly similar to Liprin-beta-1"
/protein_id="BAG57559.1"
/transl_table=1
/translation="MAEISNLKLKLTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSE
MDSERLQYEKKLKSTKSLMAKLSSMKIKVGQMQYEKQRMEQKWESLKDELASLKEQLE
EKESEVKRLQEKLVCKMKGEGVEIVDRDIEVQKMKKAVESLMAANEEKDRKIEDLRQC
LNRYKKMQDTVVLAQGKKGKDGEYEELLNSSSISSLLDAQGFSDLEKSPSPTPVMGSP
SCDPFNTSVPEEFHTTILQVSIPSLLPATVSMETSEKSKLTPKPETSFEENDGNIILG
ATVDTQLCDKLLTSSLQKSSSLGNLKKETSDGEKETIQKTSEDRAPAESRPFGTLPPR
PPGQDTSMDDNPFGTRKVRSSFGRGFFKIKSNKRTASAPNLAETEKETAEHLDLAGAS
SRPKDSQRNSPFQIPPPSPDSKKKSRGIMKLFGKLRRSQSTTFNPDDMSEPEFKRGGT
RATAGPRLGWSRDLGQSNSDLDMPFAKWTKEQVCNWLMEQGLGSYLNSGKHWVASGQT
LLQASQQDLEKELGIKHSLHRKKLQLALQALGSEEETNHGKLDFNWVTRWLDDIGLPQ
YKTQFDEGRVDGRMLHYMTVDDLLSLKVVSVLHHLSIKRAIQVLRINNFEPNCLRRRP
SDENTIAPSEVQKWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQ
LLNIPPNKTLLRRHLATHFNLLIGAEAQHQKRDAMELPDYVLLTATAKVKPKKLAFSN
FGNL"
BASE COUNT 832 a 552 c 663 g 598 t
ORIGIN
1 gagtgatgtc agctcccagc tcggtgcctg cccggattcc tgacatggtg tagtgcaggc
61 agggtgggga aaggacgggg aaggactcgt gtgctgcgag ctggcggccg ggccggagtg
121 ctggggcttt gaactccgag aggaggtgga ccagaacttt tggaactagt gccggcggct
181 ctccaccccc cagtataaaa gaacgtgtgg atcactttgc tgagtacatc caagatttga
241 agaactgaaa taaatcagct ttaaacctgc tttttaaaaa tacaaatgga cacctaccag
301 ggaacggaga tgtgtatcaa gaaaggctgg cacgtttaga aaatgataaa gaatccctcg
361 ttcttcagga gcttctaagt aggacatcct tagaaactca gaagttggat ctgatggctg
421 aaatatctaa cttgaagttg aaactgacag ctgtagagaa ggacagattg gattatgaag
481 ataagttcag agacacagag gggctgattc aggagatcaa tgatttgagg ttaaaagtta
541 gtgaaatgga cagtgagaga cttcagtatg aaaaaaagct taaatcaacc aaatctttaa
601 tggccaaact ttctagcatg aaaatcaagg tgggtcagat gcagtatgaa aagcagcgga
661 tggaacaaaa atgggagtca ctgaaggatg aactggcatc tttaaaagaa caactagaag
721 aaaaggaatc tgaagtaaaa aggctacaag aaaaattggt ttgcaagatg aaaggagaag
781 gggttgaaat tgttgataga gacatcgaag tacaaaaaat gaaaaaagct gtggagtcct
841 tgatggcagc aaatgaagaa aaggatcgga aaatagaaga tcttcgacag tgcctgaaca
901 ggtacaagaa aatgcaagac acggtggtac tggcccaagg taaaaaaggc aaagatggag
961 aatatgaaga gctgctcaat tccagttcca tctcctcttt gttggatgca cagggtttca
1021 gtgatctgga gaaaagtcca tcacccactc cagtaatggg atctcccagt tgtgacccat
1081 ttaacacaag tgttcccgaa gagttccata ctaccatctt gcaagtttcc atcccttcat
1141 tattgccagc aactgtaagc atggaaactt ctgaaaaatc aaagttgact cctaagccag
1201 agacttcatt tgaagaaaat gatggaaaca taatccttgg tgccactgtt gatacccaac
1261 tgtgtgataa acttttaact tcaagtctgc agaagtccag cagcctgggc aatctgaaga
1321 aagagacatc tgatggggaa aaggaaacta ttcagaagac ttcagaggac agagctccgg
1381 cagaaagcag gccatttggg acccttcctc ccaggccccc agggcaggac acctccatgg
1441 atgacaaccc cttcggcact cgaaaagtca gatcttcctt tggccggggc ttttttaaaa
1501 tcaaaagtaa caagagaaca gcaagtgcac caaacttagc tgaaacagaa aaagagacag
1561 cagagcacct agatctggct ggtgcttctt ctcggccaaa agattcacag aggaacagtc
1621 ccttccagat accgcctcca tctccagatt ccaaaaagaa atccagaggt atcatgaaac
1681 tctttggaaa acttaggaga agtcaatcaa ctacattcaa cccagatgac atgtctgagc
1741 ctgaattcaa aagaggaggg acaagggcaa ccgcggggcc ccgattaggt tggtctcgag
1801 acttgggaca gtctaacagt gacttggata tgccatttgc caagtggacc aaggagcagg
1861 tttgcaattg gctgatggaa cagggcttgg gctcgtacct gaattctggc aagcactggg
1921 ttgcatctgg ccaaacgctt ttgcaggctt ctcaacaaga tctagagaag gaacttggaa
1981 tcaagcattc acttcatcga aagaaactcc agctagcact ccaagccctg ggatctgaag
2041 aagaaaccaa tcatgggaag ctggatttca actgggtcac tagatggttg gatgacattg
2101 gcctccctca atataagacc cagtttgatg aaggacgggt tgatggtcga atgctacatt
2161 acatgactgt tgatgactta ctgtctctga aggttgtaag tgtgctacac catctcagta
2221 tcaaaagggc catccaggtc ctgaggatca ataactttga accaaactgt ctacggaggc
2281 ggccatctga tgagaatacc atcgccccat cagaagttca gaagtggact aaccatcgag
2341 tgatggagtg gctgcgctcc gtggacttgg cagaatatgc gcccaatctc agaggcagtg
2401 gtgtccatgg tgggctcatg gttctagagc ctcgttttaa cgtagaaaca atggctcagt
2461 tattgaacat cccacccaat aagactttgc tgcgaagaca tttggccact catttcaacc
2521 ttctgattgg ggctgaggca cagcaccaga agcgagatgc catggagctg ccggattatg
2581 tacttctaac agctactgcc aaagtgaagc caaagaaact tgcctttagc aattttggga
2641 atttg
//