LOCUS AK294256 2439 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50070 partial cds, weakly similar to Tesmin.
ACCESSION AK294256
VERSION AK294256.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2439)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2439
/clone="BRAMY2017006"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000488880"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 313..>2439
/codon_start=1
/note="weakly similar to Tesmin"
/protein_id="BAG57551.1"
/transl_table=1
/translation="MEVVPAEVNSLLPEEIMDTGITLVDDDSIEAVIVSSPIPMETEL
EEIVNINSTGDSTATPISTEPITVYSNHTNQVAVNTTITKADSNTTVKPAFPSGLQKL
GAQTPVTISANQIILNKVPQTSDLKLGNQTLKPDGQKLILTTLGKSGSPIVLALPHSQ
LPQAQKVTTQAQSGDAKLPPQQIKVVTIGGRPEVKPVIGVSALTPGSQLINTTTQPSV
LQTQQLKTVQIAKKPRTPTSGPVITKLIFAKPINSKAVTGQTTQVSPPVIAGRVLSQS
TPGTPSKTITISESGVIGSTLNSTTQTPNKIAISPLKSPNKAVKSTVQTITVGGVSTS
QFKTIIPLATAPNVQQIQVPGSKFHYVRLVTATSASSSTQPVSQNPSTNTQPLQQAKP
VVVNTTPVRMSVPIVSAQAVKQVVPKPINPTSQIVTTSQPQQRLIMPATPLPQIQPNL
TNLPPGTVLAPAPGTGNVGYAVLPAQYVTQLQQSSYVSIASNSTFTGTSGIQTQARLP
FNGIIPSESASRPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQK
AIKACLDRNPEAFKPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECYEAKIMCSSIC
KCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQISDLLTRPTPALNSGGG
KLPFTFVTKEVAEATCNCLLAQAEQAD"
BASE COUNT 757 a 599 c 526 g 557 t
ORIGIN
1 gtgatggtga tgacgaggtg aaaatggcgg atctttcgaa atacaatccc ggcccctgac
61 ataccagagg cggcggcgac ggcgacgtcg ccaccccggc tcccttctcg gtccccgggt
121 accctggagc gctccagttt ggacaaactg ggaaaggaag ctgctggcca gagctatcgt
181 gcacgggcaa aacaagcccc gccggggctc gggattgccc aggaccttct ggagccccta
241 cctcggagcc cgagggagga gaaagcggca gccgctggag tgcctgatca actttctagc
301 gggagaacga tcatggaggt ggtgccagct gaggtgaata gtttgcttcc agaggaaata
361 atggacactg gtataacttt agtggatgat gatagtattg aggctgttat tgtttcatcc
421 ccaattccca tggagacaga actggaagaa attgtcaaca taaattctac tggtgactct
481 acagccacgc ccatttccac ggaaccaatc acagtgtaca gtaaccacac taaccaagtt
541 gcagtgaata ccacaattac taaagcagat tctaatacca cagtgaaacc agcttttcca
601 agtggccttc aaaaacttgg tgctcagact cctgtgacta tatcagccaa tcagattatt
661 ttaaacaaag taccacagac atctgatctt aaacttggca atcagaccct taaaccagat
721 ggacagaagt taattttaac aactttgggc aagtctggtt caccaattgt tttagcacta
781 ccccatagcc aactacccca ggctcagaaa gttacaactc aggcccagtc aggagatgct
841 aagttaccac cgcagcaaat taaagtagtt accattggag ggaggccaga ggtgaaacct
901 gtcattggtg tctcagcatt gaccccagga agtcaactga ttaatactac aactcagccc
961 tctgtgttac agacccaaca gttaaaaaca gtacagattg ctaagaagcc tcgaacgcca
1021 acctctggtc cagtaatcac gaagctgatc tttgcaaaac caattaatag taaagcagtt
1081 acaggacaga caactcaagt ttcaccacca gtcattgcag gtagggttct ttcacagtct
1141 actcccggaa ctccatcaaa gaccataaca atatctgaaa gtggtgttat tggatcaact
1201 ttaaattcta caacacagac accaaataaa atagccatct cacctttgaa atcgccaaat
1261 aaggcagtga aatcaactgt gcagaccatc actgttggag gagtgagcac atcacagttt
1321 aagacaatta ttcctctggc aactgctccc aatgtccagc agattcaagt gcctggaagc
1381 aagtttcatt atgtccgact tgttactgcc acatcagcca gtagctcaac ccagccagtt
1441 agtcagaatc ccagtacaaa cactcagcct cttcagcaag caaagccagt ggttgttaat
1501 acaaccccag tgcggatgtc agttccaatt gtctcagctc aggctgtcaa acaagttgtt
1561 ccaaaaccaa tcaatccaac ttcacaaata gtaactacta gccagccaca gcaacggctt
1621 atcatgcctg ccacaccact gccacagatc cagcccaacc tcactaacct gccaccaggc
1681 actgtcctgg caccagctcc gggaacaggg aatgtgggtt atgcagtgct tccagctcag
1741 tatgttactc agctacagca gtcttcatat gtatcaatag caagcaactc tacctttact
1801 ggaacatctg gtatccagac ccaggcacgg cttccattca atggcataat cccatcagag
1861 tcggccagtc ggccccgaaa gccctgtaat tgtacaaaat cactgtgttt gaaattgtat
1921 tgtgattgct ttgcaaatgg tgaattttgc aacaactgca attgtactaa ttgttacaac
1981 aatttggaac atgaaaatga aaggcaaaaa gcaataaagg catgccttga cagaaatcca
2041 gaagccttta agcctaagat agggaaagga aaggagggag aatctgatcg acgtcatagc
2101 aaagggtgta attgcaaacg atcaggatgt cttaaaaact actgtgaatg ctatgaggca
2161 aaaataatgt gttcctcaat atgcaaatgt attggctgta agaattttga agaaagcccg
2221 gaaaggaaga cattgatgca tttggcagat gcagctgaag taagggtaca gcaacaaaca
2281 gcagccaaga cgaagttatc ctctcaaatt tcagacttgc ttactaggcc aacaccagct
2341 ttaaatagtg gaggcggaaa attgccattt acatttgtaa ctaaggaagt agctgaagcc
2401 acatgtaatt gcctccttgc ccaggcagag caggcagac
//