LOCUS AK294227 1739 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ59678 complete cds, highly similar to
PEX5-related protein.
ACCESSION AK294227
VERSION AK294227.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1739)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1739
/clone="BRAMY2012419"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000488851"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 16..1560
/codon_start=1
/note="highly similar to PEX5-related protein"
/protein_id="BAH11705.1"
/transl_table=1
/translation="MSSLSLKPLVQVSVGAFVQLVNEQQESRPLLSPSIDDFLCETKS
EAIARPVTSNTADIQTQLEKWDDVKFHGDRNTKGHPMAERKSSSSRTGSKELLWSSEH
RSQPELSGGKSALNSESASELELVAPTQARLTKEHRWGSALLSRNHSLEEEFERAKAA
VESDTEFWDKMQAEWEEMARRNWISENQEAQNQVTISASEKGYYFHTENPFKDWPGAF
EEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLE
LQPNNLKALMALAVSYTNTGHQQDACDALKNWIKQNPKYKYLVKSKKGSPGLTRRMSK
SPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR
PEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAV
SNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLGDLDVLLR
AFNLDP"
BASE COUNT 540 a 397 c 420 g 382 t
ORIGIN
1 agtgctaacc agaacatgtc atctttgagt ctgaagccac tggtccaggt ctcagtagga
61 gcttttgtcc agctggtgaa tgagcaacaa gaaagcagac ccctcctgag tccctccatc
121 gatgactttc tctgtgaaac caaatcggaa gcaatagcaa ggccagtaac atccaataca
181 gctgacattc aaacacaact ggaaaaatgg gacgatgtta agtttcatgg agatcgaaat
241 accaagggac atccaatggc agagagaaaa tcatcctcat ctagaactgg atcaaaagag
301 ctcttatggt cctcagaaca cagatctcaa ccagaactga gtggtggaaa aagcgccctc
361 aactctgagt cggcttcaga attggaatta gtggctccga ctcaggctcg actgaccaaa
421 gaacatcgct ggggaagcgc attactttct agaaaccact ccttagaaga agagtttgaa
481 agggcaaaag cagcagtgga gtcagataca gagttttggg ataagatgca agcagaatgg
541 gaagaaatgg ctcggaggaa ctggatatct gagaaccaag aagcccagaa ccaagtaacc
601 atctcggcta gtgagaaggg atattacttt cacactgaaa accccttcaa ggactggcct
661 ggagcatttg aagaaggctt aaaaaggctg aaggaagggg atctgccagt caccatcctg
721 ttcatggaag cagcaattct tcaggaccct ggagatgcag aggcatggca gttcctcggg
781 ataacccagg cggagaatga aaatgaacaa gcagctattg tcgccctcca gaggtgctta
841 gaattacagc ccaacaactt aaaagctttg atggccttgg ctgtgagtta tactaacact
901 ggccatcagc aggatgcctg tgacgctctg aagaattgga ttaagcaaaa tccaaagtac
961 aaataccttg tgaaaagcaa gaagggatct ccaggcctca cccggcggat gtctaagtcc
1021 ccagttgata gctctgttct ggaaggggtg aaggaattat atctggaagc tgcccaccaa
1081 aatggagata tgatcgaccc agacctgcag acaggtctag gggttctgtt ccacctgagt
1141 ggagaattta atagagcaat agatgcattt aacgctgcct taactgttcg gccagaggac
1201 tattcactat ggaaccgcct cggggcgacc ttggcgaacg gagaccgcag cgaggaagcc
1261 gtggaggcct atacgcgagc actggagatt cagccaggat tcatccggtc cagatacaac
1321 ctaggaataa gctgcatcaa cctgggcgcc tacagagaag cggtcagcaa ttttctcact
1381 gccctcagtt tgcaaagaaa gagcaggaat cagcagcaag ttcctcatcc tgcaatctct
1441 gggaatatct gggctgccct cagaattgcg ctctctctga tggaccaacc agaactcttc
1501 caggcggcta atcttggtga cctggatgtc ctcttaagag ctttcaactt ggatccttga
1561 agaaagaata ataccagtac taataatccc tgatctgtgt gattgtactg aaaaatcaaa
1621 aactatttta ttatgaattt caaaaggata aatcaaatat tcaaaaggcc atggtcatat
1681 agcccaagga aattaattcc tgtggacaat gcccagtctc tgttcagatc caaaagcac
//