LOCUS AK294220 3477 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55679 complete cds, highly similar to Mus
musculus cytoplasmic FMR1 interacting protein 2 (Cyfip2), mRNA.
ACCESSION AK294220
VERSION AK294220.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3477)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3477
/clone="BRAMY2011375"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000488844"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 97..3270
/codon_start=1
/note="highly similar to Mus musculus cytoplasmic FMR1
interacting protein 2 (Cyfip2), mRNA"
/protein_id="BAH11703.1"
/transl_table=1
/translation="MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDT
NFEDRNAFVTGIARYIEQATVHSSMVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKF
FKQLQVVPLFGDMQIELARYIETSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDH
IRFISELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWK
LVHPTDKFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFN
QAIRNTIYAALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDP
CLRGEKDPKGGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIV
LAIEDFHKQSFFFTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWI
LTDHILETKEPSMMEYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYK
LADQIFAYYKAMAGSVLLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSID
LNRLITQRISAAMYKSLDQAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSF
DAMFREANHNVSAPYGRITLHVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDK
PANVQPYYLYGSKPLNIAYSHIYSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIV
KSLLQGTILQYVKTLIEVMPKICRLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQ
SLREVGNAILFCLLIEQALSQEEVCDLLHAAPFQNILPRVYIKEGECLEVRMKRLEAK
YAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMFEVILTRIRGYLQDPIWRG
PPPTNGVMHVDECVEFHRLWSAMQFVYCIPVGTNEFTAEQCFGDGLNWAGCSIIVLLG
QQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLKKMADRIRKYQILNNEVFAILNKYMK
SVETDSSTVEHVRCFQPPIHQSLATTC"
BASE COUNT 851 a 977 c 896 g 753 t
ORIGIN
1 agagcatcct gcgccccggc gcggggccct gcggtagcct caggcccctc ccctggaccc
61 gccgcagagc cagtgcagaa tacagaaact gcagccatga ccacgcacgt caccctggaa
121 gatgccctgt ccaacgtgga cctgcttgaa gagcttcccc tccccgacca gcagccatgc
181 atcgagcctc caccttcctc cattatgtac caggctaact ttgacacaaa ctttgaggac
241 aggaatgcat ttgtcacggg cattgcaagg tacattgagc aggctacagt ccactccagc
301 atggtgatgg gctttggcct ctacctaatg gatggaaatg tcagtaacat ttacaaactg
361 gatgccaaga agagaattaa tcttagcaaa attgataaat tctttaagca gctgcaggtg
421 gtgccccttt tcggcgacat gcagatagag ctggccagat acattgagac cagtgctcac
481 tatgaagaga acaagtccaa gtggacgtgc acccagagca gcatcagccc ccagtacaat
541 atctgcgagc agatggttca gatccgggat gaccacatcc gcttcatctc cgagctcgct
601 cgctacagca acagtgaggt ggtgacgggc tcagggctgg acagccagaa gtcagacgag
661 gagtatcgcg agctcttcga cctagccctg cggggtctgc agcttctatc caagtggagc
721 gcccacgtca tggaggtgta ctcttggaag ctggttcatc ccacagacaa gttctgcaac
781 aaggactgtc ctggcaccgc ggaggaatat gagagagcca cacgctacaa ttacaccagt
841 gaggaaaaat ttgccttcgt tgaggtgatc gccatgatca aaggcctgca ggtgctcatg
901 ggcaggatgg agagcgtctt caaccaggcc atcaggaaca ccatctacgc ggcattgcag
961 gacttcgccc aggtgacgct gcgtgagccc ctgcggcagg cggtacggaa gaagaagaat
1021 gtcctcatca gcgtcctaca ggcaattcga aagaccatct gtgactggga gggagggcga
1081 gagcccccta atgacccatg cttgagaggg gagaaggacc ccaaaggtgg atttgatatc
1141 aaggtgcccc ggcgtgctgt ggggccatcc agcacacagc tgtacatggt gcggaccatg
1201 cttgaatcac tcattgcaga caaaagcggc tccaagaaga ccctgaggag cagcctggat
1261 ggacccattg tcctcgccat agaggacttt cacaaacagt ccttcttctt cacacatctg
1321 ctcaacatca gtgaagccct gcagcagtgt tgtgacctct cccagctctg gttccgagaa
1381 ttcttcctgg agttaaccat gggccgacga atccagttcc ccatcgagat gtccatgccc
1441 tggattctaa cggaccatat cctggaaacc aaagaacctt ccatgatgga gtatgtcctc
1501 taccctctgg atctgtacaa cgacagcgcc tactatgctc tgaccaagtt taaaaagcag
1561 ttcctgtacg atgagataga agctgaggtg aacctgtgtt ttgatcagtt tgtctacaag
1621 ctggcagacc agatctttgc ttactacaaa gccatggctg gcagtgtcct gttggataaa
1681 cgttttcgag ctgagtgtaa gaattatggc gtcatcattc cgtatccacc gtccaatcgc
1741 tatgaaacac tgctgaagca gagacacgtc cagctgttgg gtagatcaat tgacttgaac
1801 agactcatta cccagcgcat ctctgccgcc atgtataaat ccttggacca agctatcagc
1861 cgctttgaga gtgaggacct gacctccatt gtggagctgg agtggctgct ggagattaac
1921 cggctcacgc atcggctgct ctgtaagcat atgacgctgg acagcttcga tgccatgttc
1981 cgagaggcca atcacaatgt gtccgccccc tatggccgta tcaccctgca tgtcttctgg
2041 gaactgaact ttgactttct ccccaactac tgctacaatg ggtccactaa ccgttttgtg
2101 cggactgcca ttcctttcac ccaagaacca caacgagaca aacctgccaa cgtccagcct
2161 tattacctct atggatccaa gcctctcaac attgcctaca gccacatcta cagctcctac
2221 aggaatttcg tggggccacc tcatttcaag actatctgca gactcctggg ttatcagggc
2281 atcgctgtgg tcatggagga actgctaaag attgtgaaga gcttgctcca aggaaccatt
2341 ctccagtatg tgaaaacact gatagaggtg atgcccaaga tatgccgctt gccccgacat
2401 gagtatggct ccccagggat cctggagttc ttccaccacc agctgaagga catcattgag
2461 tacgcagagc tcaaaacaga cgtgttccag agcctgaggg aagtgggcaa tgccatcctc
2521 ttctgcctcc tcatagagca agctctgtct caggaggagg tctgcgattt gctccatgcc
2581 gcacccttcc aaaacatctt gcctagagtc tacatcaaag agggggagtg cctggaggtc
2641 cggatgaaac gtctggaagc caagtatgcc ccgctccacc tggtccctct gatcgagcgg
2701 ctggggaccc ctcagcaaat cgccattgct cgcgagggtg acctcctgac caaggagcgg
2761 ctgtgctgtg gcctgtccat gttcgaggtc atcctgaccc gcattcgggg ctacctgcag
2821 gaccccatct ggcggggccc accgcccacc aatggcgtca tgcacgtcga tgagtgtgtg
2881 gagttccacc ggctgtggag cgccatgcag ttcgtgtact gcatccctgt gggaaccaac
2941 gagttcacag ctgagcagtg tttcggcgat ggcttgaact gggctggttg ctccatcatt
3001 gtcctgctgg gccagcagcg tcgctttgac ctgttcgact tctgttacca cctgctaaaa
3061 gtgcagaggc aggacgggaa ggatgaaatc attaagaatg tgcccctgaa gaagatggcc
3121 gaccggatca ggaagtatca gatcttgaac aatgaggttt ttgccatcct gaacaaatac
3181 atgaagtccg tggagacaga cagttccact gtggagcatg tgcgctgctt ccagccaccc
3241 atccaccagt ccttggccac cacttgctaa gcagaagatc ctgcagaccc ttatctggag
3301 gaggaagaga agcaggagag agaaagccac agccagcctg ccataggatc caactggaca
3361 acgtgtggga tggacctgga aacaagcacc tccccaaaca catcaccact ccctagggcg
3421 gggcctgtgc atgctctccc atgacatctc catgctggtt tctccatagc ataaatg
//