LOCUS AK294191 1688 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55962 complete cds, highly similar to Homo
sapiens E2a-Pbx1-associated protein (EB-1), transcript variant 3,
mRNA.
ACCESSION AK294191
VERSION AK294191.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1688)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1688
/clone="BRAMY2005435"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000488815"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 118..1302
/codon_start=1
/note="highly similar to Homo sapiens E2a-Pbx1-associated
protein (EB-1), transcript variant 3, mRNA"
/protein_id="BAG57507.1"
/transl_table=1
/translation="MGPRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMED
QDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDSIELGDYTKAFLI
NGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQKPPRSITLRTGD
WGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQD
ACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPE
DLSTFAYITKDLKSNHHYRHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARKGGHSS
TLPESFENKPSKPIPKPRVSIRKSVIDPSEQKTLANLPWIVEPGQEAKRGINTKYETT
IF"
BASE COUNT 471 a 424 c 367 g 426 t
ORIGIN
1 gtaacgtata accagtatga agattcaatt cagatttaag cactttggtt tgcttttgaa
61 tcttgctatt ttctgcattt gttttgactg ctctcatcat tcaagattga cgcttggatg
121 ggacccagat gccctgtcca aacagtggga caatggttgg aaagcattgg gctacctcag
181 tacgagaacc acctgatggc taatggattt gacaatgtgc agtttatggg aagcaatgtt
241 atggaagatc aggatttgtt ggaaattgga atccttaatt ctgggcacag acaaagaatt
301 ctacaggcaa tccagctcct tccaaagatg agacccattg ggcatgatgg ctaccatccc
361 acctctgtag ctgagtggct ggattccatt gaactgggcg actacaccaa agcctttcta
421 attaatggct acacttcgat ggacctgttg aaaaaaatct gggaggttga acttattaat
481 gttttaaaaa tcaatttgat tggccacagg aaacgtattt tggcatctct gggagacagg
541 ctgcacgacg atcccccaca gaagccccct cggtccatca ccctcaggac aggagactgg
601 ggagaacctt ccattacctt gcgacctccg aatgaagcca cagcctctac cccggtacag
661 tactggcagc atcacccaga aaagcttatc ttccagtcgt gtgattacaa agctttttat
721 ttaggttcta tgctgataaa agagcttagg gggacagaat caacccaaga tgcttgtgca
781 aaaatgcggg ctaactgtca gaagtctaca gagcaaatga agaaggtccc tactattatt
841 ctttctgtct catataaagg agtcaaattt attgatgcaa caaataagaa cataattgct
901 gagcatgaaa ttcgtaatat ctcctgtgct gcccaggacc cagaagacct ctcaacattt
961 gcctatatca caaaagattt gaagtctaat caccactacc gtcatgtgtt tactgccttt
1021 gatgtgaatt tagcctatga aatcatccta accctgggac aggcattcga agtcgcttac
1081 cagctagcac tacaagcaag aaaaggggga cactcctcca cacttccaga aagctttgaa
1141 aacaaaccct ccaaacccat ccccaagccc cgcgttagca ttcgcaagtc cgtgatcgac
1201 ccatctgagc aaaagactct ggccaatcta ccgtggattg tggagccggg ccaagaagcc
1261 aagaggggca ttaataccaa gtatgaaacc acgattttct gatactcgcc gtcctcctgt
1321 cctcgcggtg ccttgctcgc caagcggtcc cggagcaggc tttccttcgc gcctccgcgt
1381 ccacccagcc caggaggaag actgctctga gcgtgcggcc ttgttacggg cgaaaggcca
1441 ctggccattc ctggggaagt tctttctgca ccagtgatgg aaaacgcaag actttccagt
1501 cgcaacccct gagaggcgtg agttgagatg ggttttccct gatgctcccg actcccctcc
1561 ccaccacctc ccaaggtatt tctgatgact ccgccccagt acttgctttg cttcatttgg
1621 ggaaaataat accttttctt taaaaaaaaa aaaaaaaaaa aaagtaaagg ggatctctaa
1681 tactgcct
//