LOCUS AK294158 1934 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57266 complete cds, highly similar to
Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20).
ACCESSION AK294158
VERSION AK294158.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1934)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1934
/clone="BRALZ2018187"
/clone_lib="BRALZ2"
/db_xref="H-InvDB:HIT000488782"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="alzheimer cortex"
CDS 336..1808
/codon_start=1
/note="highly similar to Phenylalanyl-tRNA synthetase
beta chain (EC 6.1.1.20)"
/protein_id="BAG57481.1"
/transl_table=1
/translation="MPDGKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSFIELQ
EKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIY
KTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECTGTD
FTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLINKK
VGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN
NIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISA
TKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDIVIKDSNTDVGA
KNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPGRCA
EIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGPFL"
BASE COUNT 583 a 411 c 399 g 541 t
ORIGIN
1 gtgatctgct cttccaagcc ctgggccgca cctacactga cgaagaattt gatgaactat
61 gttttgaatt tggtctggag cttgatgaaa ttgtccctcc tgagatctgc catctcctgg
121 gaggtgactc agctttcttc actattgaaa caacatctga gaaggaaata ataagtaaag
181 aacaaggtaa tgtaaaggca gcaggagcct ctgatgttgt tctttacaaa attgacgtcc
241 ctgccaatag atatgatctc ctgtgtctgg aaggattggt tcgaggactt caggtcttca
301 aagaaaggat aaaggctcca gtgtataaac gggtaatgcc tgatggaaaa atccagaaat
361 tgattatcac agaagagaca gctaagatac gtccttttgc ggtagcagca gttctccgta
421 atataaagtt tactaaagat cgatatgaca gcttcattga acttcaggag aaattacatc
481 agaatatttg caggaaaaga gcactggttg ccattggtac ccatgatttg gacactttgt
541 cgggcccatt tacttatact gcaaagcgtc cttcagatat caaattcaag cctctaaata
601 agaccaagga gtatacagcc tgtgaactga tgaacatata caagactgac aatcacctga
661 aacattattt acatatcatt gaaaacaaac ccctgtatcc agttatctat gatagcaatg
721 gtgtcgtcct ttcaatgcct cccatcatca atggggatca ttccagaata acagtaaata
781 ctagaaatat ttttattgaa tgcacgggaa ctgactttac taaggcaaaa atagttcttg
841 atattattgt caccatgttc agtgaatatt gtgagaatca atttacggtc gaagctgctg
901 aagtggtttt tcctaatgga aaatcacata cctttccaga attagcttac cgaaaggaga
961 tggtgagagc tgacctaatt aacaaaaaag ttggaatcag agaaactcca gaaaatcttg
1021 ccaaacttct gaccaggatg tatttaaaat cagaagtcat aggtgatggg aatcagattg
1081 agattgaaat ccctccaacc agagctgaca ttatccatgc atgtgatatt gtagaagatg
1141 cagctattgc ttatggatat aacaacattc agatgactct cccgaaaact tacaccatag
1201 ctaatcaatt tcctcttaat aagctcactg aacttctccg acatgacatg gcagccgctg
1261 gcttcactga agcacttacc tttgccctgt gctcccaaga agatattgct gataaactag
1321 gtgtggatat ctctgcaaca aaggcagtcc acataagtaa tcctaaaaca gctgaatttc
1381 aggtggcacg cactaccctt cttcctggcc tcctgaagac catagcagca aatcgtaaga
1441 tgccccttcc actgaaactg tttgaaatct ctgacattgt aataaaagat tctaatacag
1501 atgtaggtgc aaaaaactac agacatctct gtgctgttta ttacaacaag aatcctgggt
1561 ttgagatcat tcatgggctg ctggacagaa ttatgcagtt gctcgatgtg cctcctggtg
1621 aagacaaggg gggatatgtg atcaaagcat cagaagggcc tgctttcttc cccgggcgat
1681 gtgcagagat ctttgccagg ggtcaaagcg tcgggaagct tggggtcctt catcctgacg
1741 ttatcaccaa atttgagctg accatgccct gctcctccct agaaatcaat attggaccct
1801 ttttgtgaag attggtctct gtggtgtgat tctcttccca ggtgtccctt tctcctcccc
1861 tagtgtcctt aagtcctcct ccacagggaa catctatttg ggctttgatg tttaataaag
1921 tagaaagcac tgtc
//