LOCUS AK294131 1558 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54346 complete cds, highly similar to
Hyaluronan and proteoglycan link protein 2 precursor.
ACCESSION AK294131
VERSION AK294131.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1558)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1558
/clone="BRALZ2013943"
/clone_lib="BRALZ2"
/db_xref="H-InvDB:HIT000488755"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="alzheimer cortex"
CDS 276..1217
/codon_start=1
/note="highly similar to Hyaluronan and proteoglycan link
protein 2 precursor"
/protein_id="BAH11680.1"
/transl_table=1
/translation="MPGWLTLPTLCRFLLWAFTIFHKAQGDPASHPGTTPPSYKVRWS
KVEPGELRETLILITNGLHARGYGPLGGRARMRRGHRLDASLVIAGVRLEDEGRYRCE
LINGIEDESVALTLSLEGVVFPYQPSRGRYQFNYYEAKQACEEQDGRLATYSQLYQAW
TEGLDWCNAGWLLEGSVRYPVLTARAPCGGRGRPGIRSYGPRDRMRDRYDAFCFTSAL
AGQVFFVPGRLTLSEAHAACRRRGAVVAKVGHLYAAWKFSGLDQCDGGWLADGSVRFP
ITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYAEN"
BASE COUNT 272 a 518 c 513 g 255 t
ORIGIN
1 agacagacag ggggttgtac agaagaggtc cggtttcttg aagcagctgg aagtcctgga
61 tagttcccac ctgaaagtct gtttgcaaaa ggagcaactg tgttgaacag gggctcaagt
121 tccagggttt taaggtgctt ggaactccca ggagcctggc aaaccttcat ccagaacctc
181 ttcctcaagc aagacaaaaa gctgctaagc actgctccct ccgtctctgt gaagagacca
241 gcttctaaca gacggtgccg ggctgacccc ccatcatgcc aggctggctc accctcccca
301 cactctgccg cttccttctt tgggccttca ccatcttcca caaagcccaa ggagacccag
361 catcccaccc gggcaccacc cctcccagct acaaggtgcg ctggagcaag gtggagcctg
421 gggagctccg ggaaacgctg atcctcatca ccaacggact gcacgcccgg gggtatgggc
481 ccctgggagg gcgcgccagg atgcggaggg ggcatcgact agacgcctcc ctggtcatcg
541 cgggcgtgcg cctggaggac gagggccggt accgctgcga gctcatcaac ggcatcgagg
601 acgagagcgt ggcgctgacc ttgagcttgg agggtgtggt gtttccgtac caacccagcc
661 ggggccggta ccagttcaat tactacgagg cgaagcaggc gtgcgaggag caggacggac
721 gcctggccac ctactcccag ctctaccagg cttggaccga gggtctggac tggtgtaacg
781 cgggctggct gctcgagggc tccgtgcgct accctgtgct caccgcacgc gccccgtgcg
841 gcggccgagg ccggcccggg atccgcagct acggaccccg cgaccggatg cgcgaccgct
901 acgacgcctt ctgcttcacc tccgcgctgg cgggccaagt gttcttcgtg cccgggcggc
961 tgacgctgtc tgaagcccac gcggcgtgcc ggcgacgcgg cgccgtggtg gccaaggttg
1021 ggcacctcta cgccgcctgg aagttttcgg ggctagacca gtgcgacggc ggctggctgg
1081 ctgacggcag tgtgcgcttc ccaatcacca cgccgaggcc gcgctgcggg gggctcccgg
1141 atcccggagt gcgcagtttc ggcttcccca ggccccaaca ggcagcctat gggacctact
1201 gctacgccga gaattaggcg cccaccgtgt cccctccagc gcgcgcgaag aagcttggga
1261 gtcgtggcgg gggtctctcg ccaccccttt ccggagagcc tcccctccct ccagacccgg
1321 agcggcctct ccagacctgc cttcccagcc gggggctgcg ggcctcggac cccggctggc
1381 ccggcggcgg ggaggggagg cgggggcgcc tccggcggcg agatgcagag gtgaccctcg
1441 gacccgctgc cgttcgcgaa ccctagcaga ggactcagcc accgccgagg ggagggtgag
1501 gcggccgggg gcattaactg acctctgagt acagcaataa aataacctgg ggatcttt
//