LOCUS AK294079 1372 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53031 complete cds, highly similar to Protein
DEK.
ACCESSION AK294079
VERSION AK294079.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1372)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1372
/clone="BRALZ2002197"
/clone_lib="BRALZ2"
/db_xref="H-InvDB:HIT000488703"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="alzheimer cortex"
CDS 161..1204
/codon_start=1
/note="highly similar to Protein DEK"
/protein_id="BAG57421.1"
/transl_table=1
/translation="MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEE
EEEKEKSLIVEGKREKKKVERIHFFLSKKKTDELRNLHKLLYNRPGTVSSLKKNVGQF
SGFPFEKGSVQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELVKRILNFLMHPKP
SGKPLPKSKKTCSKGSKKERNSSGMARKAKRTKCPEILSDESSSDEDEKKNKEESSDD
EDKESEEEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESE
DSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLTER
KDFIKTTVKELIS"
BASE COUNT 503 a 256 c 330 g 283 t
ORIGIN
1 aaaatcttgt tgattctggg gagccgagcg cgcggcgcga gcgtcacgcc agacagcggc
61 ccgcgcgcct tctcctcggc gtcggccgcc gccgcctccc agaacctctt cgtgccctcg
121 cgtgccaggc ccgcggcggc cgaaatccgc ggttcacagc atgtccgctt cggcccctgc
181 tgcggagggg gagggaaccc ccacccagcc cgcgtccgag aaagaacccg aaatgcccgg
241 tcccagagag gagagcgagg aggaagagga cgaggacgac gaggaggagg aggaggagga
301 aaaagaaaag agcctcatcg tggaaggcaa gagggaaaag aaaaaagtag agaggataca
361 tttttttcta agtaagaaga aaaccgatga acttagaaat ctacacaaac tgctttacaa
421 caggccaggc actgtgtcct cattaaagaa gaatgtgggt cagttcagtg gctttccatt
481 tgaaaaagga agtgtccaat ataaaaagaa ggaagaaatg ttgaaaaaat ttagaaatgc
541 catgttaaag agcatctgtg aggttcttga tttggagaga tcaggtgtaa atagtgaact
601 agtgaagagg atcttgaatt tcttaatgca tccaaagcct tctggcaaac cattgccgaa
661 atctaaaaaa acttgtagca aaggcagtaa aaaggaacgg aacagttctg gaatggcaag
721 gaaggctaag cgaaccaaat gtcctgaaat tctgtcagat gaatctagta gtgatgaaga
781 tgaaaagaaa aacaaggaag agtcttcaga tgatgaagat aaagaaagtg aagaggagcc
841 accaaaaaag acagccaaaa gagaaaaacc taaacagaaa gctacttcta aaagtaaaaa
901 atctgtgaaa agtgccaatg ttaaaaaagc agatagcagc accaccaaga agaatcaaaa
961 cagttccaaa aaagaaagtg agtctgagga tagttcagat gatgaacctt taattaaaaa
1021 gttgaagaaa ccccctacag atgaagagtt aaaggaaaca ataaagaaat tactggccag
1081 tgctaacttg gaagaagtca caatgaaaca gatttgcaaa aaggtctatg aaaattatcc
1141 tacttatgat ttaactgaaa gaaaagattt cataaaaaca actgtaaaag agctaatttc
1201 ttgagataga ggacagagaa gatgactcgt tcccatagat ttgaagatct gatttatacc
1261 attataccag caaagagaat gtatttcctt ttctaaatcc ttgttaagca acatcacttt
1321 ttaaactcac ataggtaggt atctttatag ttgtagacta tggaatgtca gt
//