LOCUS AK294067 1734 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53312 complete cds, highly similar to
Heterogeneous nuclear ribonucleoprotein K.
ACCESSION AK294067
VERSION AK294067.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1734
/clone="BRALZ2000323"
/clone_lib="BRALZ2"
/db_xref="H-InvDB:HIT000488691"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="alzheimer cortex"
CDS 200..1579
/codon_start=1
/note="highly similar to Heterogeneous nuclear
ribonucleoprotein K"
/protein_id="BAG57412.1"
/transl_table=1
/translation="METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVE
LRILLQSKNAGAVIGKGGKNIKALRTDYYLVFVVFDSILSISADIETIGEILKKIIPT
LEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGA
KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQ
PYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYD
DMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGF
SADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD
LAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSV
KQYADVEGF"
BASE COUNT 473 a 361 c 450 g 450 t
ORIGIN
1 gagaaggcgg gggaggggag cctgcgctcg ttttctgtct agctccgacc ggctgaggcg
61 gcgcggcagc ggagggacgg cagtctcgca cggctactgc agcactgggg tgtcagttgt
121 tggtccgacc cagaacgctt cagttgtgct ctgcaaggat atataataac tgattggtgt
181 gcccgtttaa taaaagaata tggaaactga acagccagaa gaaaccttcc ctaacactga
241 aaccaatggt gaatttggta aacgccctgc agaagatatg gaagaggaac aagcatttaa
301 aagatctaga aacactgatg agatggttga attacgcatt ctgcttcaga gcaagaatgc
361 tggggcagtg attggaaaag gaggcaagaa tattaaggct ctccgtacag actactatct
421 ggtatttgtg gtgtttgaca gcatattgag tatcagtgct gatattgaaa caattggaga
481 aattctgaag aaaatcatcc ctaccttgga agagggcctg cagttgccat cacccactgc
541 aaccagccag ctcccgctcg aatctgatgc tgtggaatgc ttaaattacc aacactataa
601 aggaagtgac tttgactgcg agttgaggct gttgattcat cagagtctag caggaggaat
661 tattggggtc aaaggtgcta aaatcaaaga acttcgagag aacactcaaa ccaccatcaa
721 gcttttccag gaatgctgtc ctcattccac tgacagagtt gttcttattg gaggaaaacc
781 cgatagggtt gtagagtgca taaagatcat ccttgatctt atatctgagt ctcccatcaa
841 aggacgtgca cagccttatg atcccaattt ttacgatgaa acctatgatt atggtggttt
901 tacaatgatg tttgatgacc gtcgcggacg cccagtggga tttcccatgc ggggaagagg
961 tggttttgac agaatgcctc ctggtcgggg tgggcgtccc atgcctccat ctagaagaga
1021 ttatgatgat atgagccctc gtcgaggacc acctccccct cctcccggac gaggcggccg
1081 gggtggtagc agagctcgga atcttcctct tcctccaccg ccaccaccta gagggggaga
1141 cctcatggcc tatgacagaa gagggagacc tggagaccgt tacgacggca tggttggttt
1201 cagtgctgat gaaacttggg actctgcaat agatacatgg agcccatcag aatggcagat
1261 ggcttatgaa ccacagggtg gctccggata tgattattcc tatgcagggg gtcgtggctc
1321 atatggtgat cttggtggac ctattattac tacacaagta actattccca aagatttggc
1381 tggatctatt attggcaaag gtggtcagcg gattaaacaa atccgtcatg agtcgggagc
1441 ttcgatcaaa attgatgagc ctttagaagg atccgaagat cggatcatta ccattacagg
1501 aacacaggac cagatacaga atgcacagta tttgctgcag aacagtgtga agcagtatgc
1561 agatgttgaa ggattctaat gcaagatatt ttttcttttt tatagtgtga agcagtattc
1621 tggaaagttt ttctaagact agtgaagaac tgaaggagtc ctgcatcttt ttttttttat
1681 ctgcttctgt ttaaaaagcc aacattcctc tgcttcatag gtgttctgca tttg
//