LOCUS AK294066 999 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ57483 complete cds, highly similar to Collagen alpha-5(IV) chain precursor. ACCESSION AK294066 VERSION AK294066.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 999) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..999 /clone="BRALZ2000298" /clone_lib="BRALZ2" /db_xref="H-InvDB:HIT000488690" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="alzheimer cortex" CDS 27..452 /codon_start=1 /note="highly similar to Collagen alpha-5(IV) chain precursor" /protein_id="BAG57411.1" /transl_table=1 /translation="MPMSMQPLKGQSIQPFISRCAVCEAPAVVIAVHSQTIQIPHCPQ GWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYS FWLATVDVSDMFSKPQSETLKAGDLRTRISRCQVCMKRT" BASE COUNT 296 a 196 c 208 g 299 t ORIGIN 1 cttactggct ctctacccca gagcccatgc caatgagcat gcaaccccta aagggccaga 61 gcatccagcc attcattagt cgatgtgcag tatgtgaagc tccagctgtg gtgatcgcag 121 ttcacagtca gacgatccag attccccatt gtcctcaggg atgggattct ctgtggattg 181 gttattcctt catgatgcat acaagtgcag gggcagaagg ctcaggtcaa gccctagcct 241 cccctggttc ctgcttggaa gagtttcgtt cagctccctt catcgaatgt catgggaggg 301 gtacctgtaa ctactatgcc aactcctaca gcttttggct ggcaactgta gatgtgtcag 361 acatgttcag taaacctcag tcagaaacgc tgaaagcagg agacttgagg acacgaatta 421 gccgatgtca agtgtgcatg aagaggacat aacattttga agaattcctt ttgtgtttta 481 aaatgtgata tatatatata taaaattcct aggatgcagt gtctcattgt ccccaacttt 541 actactgctg ccgtcaatgg tgctactata tatgatcaag ataacatgct gactagtaac 601 catgaagatt cagatgtacc tcagcaatgc gccagagcaa agtctctatt atttttctac 661 taaagaaata aggaagtgaa tttacttttt gggtccagaa tgactttctc caagaattat 721 aagatgaaaa ttatatattt tgcccagtta ctaaaatggt acattaaaaa ttcaattaag 781 agaagagtca cattgagtaa aataaaagac tgcagtttgt gggaagaatt atttttcacg 841 gtgctactaa tcctgctgta tcccgggttt ttaatataaa ggtgttaagc ttattttgct 901 ttgtaagtaa agaatgtgta tattgtgaac agccttttag ctcaaaatgt tgagtcattt 961 acatatgaca tagcatgaat cactctttac agaaaatgt //