LOCUS AK294060 1639 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56407 complete cds, highly similar to
SLIT-ROBO Rho GTPase-activating protein 2.
ACCESSION AK294060
VERSION AK294060.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1639)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1639
/clone="BRACE3052568"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488684"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 12..1328
/codon_start=1
/note="highly similar to SLIT-ROBO Rho GTPase-activating
protein 2"
/protein_id="BAG57406.1"
/transl_table=1
/translation="MMDPYNLAICFGPSLMSVPEGHDQVSCQAHVNELIKTIIIQHEN
IFPSPRELEGPVYSRGGSMEDYCDSPHGETTSVEDSTQDVTAEHHTSDDECEPIEAIA
KFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTEDGVVE
RSSPKSEIEVISEPPEEKVTARAGASCPSGGHVADIYLANINKQRKRPESGSIRKTFR
SDSHGLSSSLTDSSSPGVGASCRPSSQPIMSQSLPKEGPDKCSISGHGSLNSISRHSS
LKNRLDSPQIRKTATAGRSKSFNNHRPMDPEVIAQDIEATMNSALNELRELERQSSVK
HTPDVVLDTLEPLKTSPVVAPTSEPSSPLHTQLLKDPEPAFQRSASTAGDIACAFRPV
KSVKMAAPVKPPATRPKPTVFPKTNATSPGVNSSTSPQSTDKSCTV"
BASE COUNT 404 a 492 c 415 g 328 t
ORIGIN
1 gtgaagagaa catgatggac ccctacaacc tcgccatctg cttcgggccc tcgctaatgt
61 cagtgccaga gggccacgac caggtgtcct gccaagccca cgtgaatgag ctgatcaaaa
121 ccatcatcat ccagcatgag aacatcttcc caagccccag ggagctggag ggccctgtct
181 acagcagagg aggaagcatg gaggattact gtgatagccc tcatggagag actacctcgg
241 ttgaagactc aacccaggat gtgaccgcag agcaccacac gagcgatgac gaatgtgagc
301 ccatcgaggc cattgccaag tttgactacg tgggccggac agcccgagag ctatccttta
361 agaagggagc atccctgctg ctttaccagc gggcttccga cgactggtgg gaaggccggc
421 acaatggcat cgacggactc atcccccatc agtacatcgt ggtccaagac accgaggacg
481 gtgtcgtgga gaggtccagc cccaagtctg agattgaggt catttctgag ccacctgaag
541 aaaaggtgac agccagagcg ggggccagct gtcccagtgg gggtcatgta gccgatattt
601 atcttgcaaa catcaacaag caaaggaagc gtccagaatc tgggagcatc cggaaaactt
661 ttcggagtga cagccatggg ctgagcagtt ccctgactga ctcctcctcc ccaggggtgg
721 gggctagctg ccgcccatcc tcccagccca tcatgagcca gagcctcccc aaagaagggc
781 cagataagtg ttccatcagt gggcacggga gcctcaactc catcagccgc cactcatccc
841 tgaagaatcg gctggatagt ccacagatcc ggaagactgc cacagcggga aggtcaaaaa
901 gcttcaataa ccatcggccc atggaccctg aggtcattgc tcaggatatt gaggcaacaa
961 tgaactcggc cctgaatgag ctacgggaac tagaacggca gagcagtgtc aaacacaccc
1021 ctgacgtggt tctggacacc ttggagcccc tcaaaacctc cccagtggtg gcccccacgt
1081 cagagccctc cagccctctg cacacccagc tcctcaagga ccccgagccc gccttccagc
1141 gcagcgccag tactgctggg gacatcgcct gcgccttccg gcctgtcaag tctgtcaaga
1201 tggctgcccc ggtcaaacca ccagccacac ggcccaagcc cactgtcttc cccaaaacaa
1261 atgccactag ccctggtgtc aactcatcaa cttccccaca gtctactgac aagtcttgta
1321 ctgtctgagg gataataatt taattgttct agacaagggg actataggga ctgactgtta
1381 ttaaaatctt cctatttaac tagcttgggg acttcagttg aaaattaggt tctaagttgt
1441 tcttgcagga attagcctcc ccgtctccca aaaccttgag aatgaagccc ttggtatcgc
1501 ctctcccttc ccactgccct ctgcttcccc cagtcgtcgt aattcagcca gctgcagtcc
1561 gtaccgttct taggttagcc agagacaggt tttcattatc aggtcactgt gaaatctggt
1621 aaggcagtcc tgaggacat
//