LOCUS AK294018 1589 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60468 complete cds, weakly similar to
Synaptonemal complex protein 2.
ACCESSION AK294018
VERSION AK294018.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1589)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1589
/clone="BRACE3046251"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488642"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 701..1567
/codon_start=1
/note="weakly similar to Synaptonemal complex protein 2"
/protein_id="BAG57379.1"
/transl_table=1
/translation="MLDSFLLSLGFLVTEKTVNHLLQQEGLKTFNCILHAVPREERKK
FPLSEGMCHLMKDLARTLLTVGDYDQQVAISEALCRLTIKKSRDELVHKWFDDEVIAE
AFKEIKDREFETDSRRFLNHLNNRLGDQRRVYSFPCIAAFADEHEMRKPADEKLEKFW
IDFNLGSQSVTFYIDNAENTLWDSVTLPKEAVMNFSITETEKIKIFIIYLKKPMIISY
KEVMKIEIHFDLQFNISQVSIQALGEDKQMLPDQTKISSELFSKSDKEDRESPSGLER
ETEVSLQKTSLL"
BASE COUNT 493 a 300 c 366 g 430 t
ORIGIN
1 agcgcgcacg caatcgcgtt tccggagaga cctggctgct gtgtcccgcg gcttgcgctc
61 cgtagtggac tccgcgggcc ttcggcagat gcaggcctgg ggtagtctcc tttctggact
121 gagaagagaa gaatggagaa gcccctcttc ccattagtgc ctttgcattg gtttggcttt
181 ggctacacag cactggttgt ttctggtggg atcgttggct atgtaaaaac agaaaaacaa
241 agatgctttg cagcctatta aggaagatag gactgggaag gcccaggatg atgctttctg
301 gcttcaatca cttattacgg atgcattcca tgataaagga tttcagaaaa taaaagaata
361 ctttcaacag aaagagagcc actttcctca aaaatataat cgtcttctat tataccgtct
421 tgacagatca ataaataagg aactagataa aaatgaattt cagtctgtgt cactgttgct
481 gaaatgtatt cagcgattcc tcgtagatgg cctgaaagaa gatgaacctc tgctaattcg
541 gcagggactg atcccaaagc tagtttcctg gtttgaaaga acaacaggaa ttctgacctc
601 ggaaggccta gcctcagaca cgtcgctgat ttgtgttata gaagatttct ttgacactgc
661 attgattatt tccaggagta gtagtgaagg gaaaattcag atgttggatt ccttcctact
721 tagcttagga ttcctggtga cagaaaagac tgtaaatcat ttgcttcaac aggagggctt
781 gaagactttt aactgcattt tgcacgctgt ccctcgagaa gagagaaaaa aattcccttt
841 gtcagaaggc atgtgtcatc ttatgaaaga ccttgcaagg acactcttga ctgtgggtga
901 ttatgaccag caggttgcta tttctgaagc gctgtgtaga ctgacgatta aaaaatcaag
961 ggatgaactt gtccataaat ggtttgatga tgaagtcatt gctgaagctt tcaaagaaat
1021 taaggatcga gaatttgaga cggacagtag acgttttctc aatcacctaa acaacagact
1081 tggtgaccaa agaagggtgt attcatttcc gtgtattgct gcttttgctg atgagcatga
1141 gatgagaaaa ccagcggatg aaaaattaga gaaattttgg atcgacttca acctaggaag
1201 tcagagtgtc actttttata tagacaatgc tgagaatact ctatgggact cagtgacact
1261 tccgaaggaa gcggtgatga atttcagcat aacagaaacg gagaagataa agatatttat
1321 catttacctg aagaagccca tgattatcag ctacaaagaa gtcatgaaaa tagaaatcca
1381 ttttgatttg cagttcaaca tatcacaagt ttccattcaa gctttaggag aagacaaaca
1441 gatgttgcct gaccagacga aaatctcctc agaacttttt agtaagtctg ataaagaaga
1501 cagggagagt cccagtggcc ttgaaagaga aacagaagtc tcattacaga aaacatctct
1561 tctctgagag taatcaagat tcaagtacc
//