LOCUS AK293950 1820 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55536 complete cds, highly similar to Homo
sapiens pleckstrin homology domain containing, family H member 1,
mRNA.
ACCESSION AK293950
VERSION AK293950.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1820)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1820
/clone="BRACE3033444"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488574"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 589..1578
/codon_start=1
/note="highly similar to Homo sapiens pleckstrin homology
domain containing, family H member 1, mRNA"
/protein_id="BAG57326.1"
/transl_table=1
/translation="MAALMAQVEYGDLEKPALPGPGGTSPAKAQHLLQQVLDRFHPRR
YRHGAPAEQLRHLADMLTTKWATLQGCSPPECIRIYLTVARKWPFFGAKLFAAQPAQL
SSKENALVWIAVNEDGVSILDHNTMQVHITYPYSSVTTFGGCRDDFMLVIRSIPDKSS
GKSHIEKLIFRMAAPKPQHHAVLSWVLTCSSLPCSSPQGRADSSLRANQSRTLGLLFS
EGHCASERISRPTGAHTTGPLNSTVMIPFGYFLPDCRSHLHHGQLYEPLHYNCEPPHQ
PTRSLPAVGTGWTTVLFFCFLCYQGANVAVNISPTRFPTTTSASGFRDIYPRV"
BASE COUNT 420 a 516 c 445 g 439 t
ORIGIN
1 acttttcctg cctcagcatc acttcctctg gtatgtcaag cagcagctcc aacgccatgc
61 agatcccaga agtgaaactg gccagtatgc cacctactgc cagcgggcag tggagcggac
121 cctgcggacc ggggagcggg aagccaggcc atcgcgcatg gaagtggtgt ccatcctgct
181 gcgtaacccc ttccaccact ccttgccctt cagcatcccc gtgcacttta ccaacgggac
241 ttaccatgtg gttggttttg acggctcttc cacggttgat gagttcctcc agcggctgaa
301 ccaggagata ggcatgagaa agccatccca ctctggcttt gccctcttca cggacgatcc
361 ctcgggcagg gacctggagc actgcctgca gggaagtgtc aagatctgtg atgccatctc
421 caagtgggaa caagccatga aggagctgca ccccggaaag tctgagggct gtactttcgc
481 agtcaagtca aaggggagac ggaccgagaa cggctgctcc ttgcctctca aaccagtaga
541 gagatagtgg cagggaggtt tcctatcaac aaggaattgg ctcttgagat ggctgccctg
601 atggcccagg tagaatatgg ggacttggag aagcctgccc tgccaggccc tggaggcaca
661 tcccctgcca aggctcagca tcttctccag caggtcctag acaggttcca ccccaggcgc
721 tatagacatg gggcccccgc tgaacagctg aggcacctgg cagatatgtt gaccacaaaa
781 tgggcaacat tgcaaggatg ctcccctcct gagtgcatcc gcatctacct gaccgtggcc
841 aggaaatggc ctttctttgg tgctaaactt tttgctgctc agcctgccca gctgtcttcc
901 aaggagaacg ctctggtgtg gattgctgtg aatgaggatg gcgtcagcat cctggaccac
961 aacactatgc aagtgcacat cacttacccc tactcttcag tgacaacgtt tggtggctgc
1021 agggatgact tcatgcttgt gattagatct atcccagaca agagctctgg aaaaagccac
1081 attgagaagt tgatcttccg gatggctgct cccaagcccc agcatcatgc agtcctcagt
1141 tgggtgctta cgtgctcttc tcttccttgc agcagtcctc aaggcagggc agattcctct
1201 ttaagagcta accagagcag aacactgggc ctccttttct cagaagggca ctgtgcatct
1261 gagaggatct ccagaccaac aggagcccac accactgggc ctctgaacag cacagttatg
1321 attccctttg gatattttct cccagattgc agaagccacc ttcatcatgg ccagctatat
1381 gaaccattgc actacaactg tgaacccccc caccaaccca cccggagcct gccagctgtg
1441 ggaactggat ggacgacagt tcttttcttc tgtttcctgt gctaccaagg ggccaacgtt
1501 gctgtgaata tttctcctac ccgattcccc accaccacta gtgcctctgg atttagagat
1561 atatatccta gggtatgata ctactgtgac gggtctaaca gcccccggct actcttgttc
1621 tgtgaaatgt gtattttagt ctctgtgaag cctttactct ctaggtgcct tataatgttt
1681 cagggctcaa ctttttaaaa tccagaccca gtgttaaaac catttattcc ttttttcata
1741 agaataatga ctccagatgc tacctgattc tagacataga cagggatgat ccactgttac
1801 tgagggcatc agtgctataa
//