LOCUS AK293929 3775 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61221 complete cds, highly similar to Protein
FAM21C.
ACCESSION AK293929
VERSION AK293929.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3775)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3775
/clone="BRACE3031000"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488553"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 524..3595
/codon_start=1
/note="highly similar to Protein FAM21C"
/protein_id="BAG57309.1"
/transl_table=1
/translation="MKILPITVTMNKTSTPHKRVMRKRMMMAVTFLLTLRRRRKILRT
LKKILDLKEADLHRLQMSWLPASRGMPWVEWTRSRQPYPQESDLFTEAPQDRQAGASV
KEESSSSKPGKKIPAGAVSVFLGDTDVFGAASVPSLKEPQKPEQPTPRKSPYGPPPTG
LFDDDDGDDDDDFFSAPHSKPSKTRKVQSTADIFGDEEGDLFKEKAVASPEATVSQTD
ENKARAEKKDLFSSQSASNLKGASLLPGKLPTSVSLFDDEDEEDNLFGGTAAKKQTLS
LQAQREEKAKASELSKKKASALLFSSDEEDQWNIPASQTHLASDSRSKGEPRDSGTLQ
SQEAKAVKKTSLFEEDKEDDLFAIAKDSQKKTQRVSLLFEDDVDSGGSLFGSPPTSVP
PATKKKETVSEAPPLLFSDEEEKEAQLGVKSVDKKVESAKESLKFGRTDVAESEKEGL
LTRSAQETVKHSDLFSSSSPWDKGTKPRTKTVLSLFDEEEDKMEDQNIIQAPQKEVGK
GCDPDAHPKSTGVFQDEELLFSHKLQKDNDPDVDLFAGTKKTKLLEPSVGSLLGDDED
DDLFSSAKSQPLVQEKKRVVKKDHSVNSFKNQKHPESIQGSKEKGIWKPETPQDSSGL
APFKTKEPSTRIGKIQANLAINPAALLPTAASQISEVKPVLPELAFPSSEHRRSHGLE
SVPVLPGSGEAGVSFDLPAQADTLHSANKSRVKMRGKRRPQTRAARRLAAQESSEAED
MSIPRGPIAQWADGAISPNGHRPQLRAASGEDSTEEALAAAAAPWEGGPVPGVDTSPF
AKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFPA
LGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQQDVILTTQ
DIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVKPKEKSKKKVEAKSI
FDDDMDDIFSSGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDDPLNAFGGQ"
BASE COUNT 1135 a 871 c 959 g 810 t
ORIGIN
1 gctggcagcc tcggagccca ccgagccggg cggctgggat gatgaaccgg acgacccccg
61 accaggagct ggtgccggcg tcggagcccg tgtgggagcg gccgtggtcg gtggaggaga
121 tccgcaggag cagccagagc tggtcgctgg cggccgacgc gggcctacta cagtttctac
181 aggaattctc acagcaaact atctctagga cccatgaaat caagaaacaa gtggacggac
241 taatccggga aaccaaagcc acagattgtc gcctgcataa tgtcttcaat gacttcctta
301 tgctctctaa tacccagttc atagagaatc gtgtatatga tgaagaagtg gaggagccga
361 caaccttacc ctcaggagaa gcaaaacctc ggaagacact caaagctgtt catggaacaa
421 gaagatgtag gtcttggaga gctgtccagt gaagaaggct ctgtaggcag tgatcgtggc
481 agtattgtgg acactgagga agagaaagaa gaggaggagt cagatgaaga ttttgcccat
541 cacagtgaca atgaacaaaa ccagcacacc acacaaacga gtgatgagga agaggatgat
601 gatggctgtg acctttttgc tgactctgag aaggaggagg aagatattga ggacattgaa
661 gaaaatacta gacctaaaag aagcagacct acatcgtttg cagatgagct ggctgcccgc
721 atcaaggggg atgccatggg tcgagtggac gaggagccga caaccttacc ctcaggagag
781 tgacctcttc acggaagccc cccaggatcg gcaagctgga gcctctgtta aggaggagtc
841 ttcatcatcc aaacctggaa agaaaatccc agcaggagct gtttctgtat ttttaggaga
901 cacggatgtg tttggtgctg cctccgttcc atcactgaag gagccacaga agcctgagca
961 gcccactcca aggaaaagcc cctatggtcc ccctcccact ggcctctttg atgatgatga
1021 tggtgatgat gatgacgact ttttctcggc accccacagc aaaccttcta aaacacgcaa
1081 agtccaatcc actgccgata tctttggtga cgaagaagga gatctgttca aagaaaaagc
1141 cgtagcatcg ccagaagcca ctgtgagtca gacagatgaa aataaagcaa gagcagaaaa
1201 aaaggatttg ttttcttctc aaagtgcgag taacttaaaa ggtgcatctc tgctgcctgg
1261 caagctcccc acgtcggttt ccctgtttga tgatgaagat gaagaggata atctttttgg
1321 gggtacagct gctaagaagc agacattgtc tctacaagct cagagagaag agaaagcaaa
1381 agcctccgag ctctccaaaa agaaagcatc tgccctgttg ttcagcagtg atgaggagga
1441 ccagtggaat attcctgctt cacagaccca cttagcatct gacagcaggt ctaaaggaga
1501 acccagggat tctgggaccc tccagagcca ggaggccaag gctgtgaaaa agaccagtct
1561 ctttgaggaa gacaaagaag atgatctttt tgccattgcc aaggacagcc aaaagaagac
1621 ccagagagtg tcactcctct ttgaagacga tgttgatagc ggaggctctc tgtttggctc
1681 tcctcccaca tctgttcctc ctgcaacaaa gaaaaaagag actgtctctg aggcaccacc
1741 tttgctgttc agcgatgaag aagagaagga ggcacaactt ggagtgaagt ctgtggataa
1801 gaaggttgag agtgccaagg agtcattaaa atttgggaga actgatgtgg ctgagtcaga
1861 aaaggaagga cttttgacta gatctgctca ggaaacagtc aagcattctg atttattttc
1921 ttcatcatcc ccatgggaca aaggaaccaa gcctagaacc aaaactgttc ttagcttgtt
1981 tgatgaggaa gaggataaaa tggaagatca aaacattatc caggctccac agaaagaagt
2041 aggaaagggc tgcgatcctg atgcccaccc caagagcaca ggtgtcttcc aggatgaaga
2101 gctgcttttc agccacaagc tccaaaagga caatgaccca gatgttgatc tttttgctgg
2161 caccaaaaaa accaagctgt tagagccaag tgttgggagc ctgcttgggg atgatgaaga
2221 tgatgatctt ttcagctctg ccaagtccca gcctttggta caagagaaaa agagagtagt
2281 gaaaaaagac cactctgtta actctttcaa aaaccagaag catcctgaat ccattcaagg
2341 tagtaaagaa aaaggcatat ggaagccgga aacacctcag gactcatcag gtctcgctcc
2401 atttaaaacc aaagaaccat ccactcggat cgggaagata caagcaaatt tagcgatcaa
2461 cccagcggcc ttgctgccca cagcggcttc ccagatctct gaagtaaagc ctgttttgcc
2521 agaattggct tttccttcat ctgaacacag aaggagccac ggtctggaaa gtgtgcctgt
2581 ccttcccggg agtggggagg ccggtgtgag ttttgatctt ccagctcagg cagacacctt
2641 acacagtgca aacaagagcc gtgtcaagat gagagggaag cgtagaccgc agacccgtgc
2701 agctaggcgg ctggctgctc aggagtccag cgaggctgag gacatgagca tccccagagg
2761 acccattgca cagtgggctg atggcgccat ttccccaaat ggccatcggc cacagctcag
2821 agcagccagt ggagaagaca gcactgagga ggccctggca gctgccgctg caccttggga
2881 aggtggtcct gtgcctggag tggacacaag cccctttgca aagtctctgg gtcattccag
2941 aggggaggct gacctttttg attctgggga cattttttcc acgggcactg gatctcagtc
3001 cgtggagaga acaaaaccca aggcaaagat agcagagaat cctgccaacc caccagtggg
3061 tggtaaagca aagagcccca tgtttcctgc tctaggcgag gccagcagtg atgatgatct
3121 ctttcagtct gctaaaccaa aaccagcaaa gaaaacaaat ccctttcctc tcctggaaga
3181 tgaggatgac ctctttacag atcagaaagt caagaagaat gagacaaaat ccagtagtca
3241 gcaggatgtc atattaacaa cacaagatat ttttgaggat gatatatttg ctacggaagc
3301 aattaaaccc tctcagaaaa ccagagagaa ggagaaaaca ttggaatcta atttatttga
3361 tgataacatt gatatctttg ctgacttaac tgtaaaacca aaagaaaagt ccaaaaagaa
3421 agtggaagcc aagtctatat ttgatgatga tatggatgac atcttctcct ctggtatcca
3481 ggctaagaca accaaaccaa aaagccgatc tgcacaggcc gcacctgaac caagatttga
3541 acacaaggtg tccaacatct ttgatgatcc cctgaatgcc tttggaggcc agtagagcac
3601 acagggtatc cacatgttac cctgcagcta cattgttgag ttagtgatga tgttgtatat
3661 gctgatggtc ttaactggat tacaaaaagc aaatactaga acagctagct catcgttcac
3721 ccaatgtact tggtattttt ctgcactggt ttaatcatgc ttaatactac aaaac
//