LOCUS AK293863 3632 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51504 complete cds, highly similar to Reelin
precursor (EC 3.4.21.-).
ACCESSION AK293863
VERSION AK293863.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3632)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3632
/clone="BRACE3020370"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488487"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 546..3479
/codon_start=1
/note="highly similar to Reelin precursor (EC 3.4.21.-)"
/protein_id="BAG57256.1"
/transl_table=1
/translation="MCSGHGRCIQGNCVCDEQWGGLYCDDPETSLPTQLKDNFNRAPS
SQNWLTVNGGKLSTVCGAVASGMALHFSGGCSRLLVTVDLNLTNAEFIQFYFMYGCLI
TPNNRNQGVLLEYSVNGGITWNLLMEIFYDQYSKPGFVNILLPPDAKEIATRFRWWQP
RHDGLDQNDWAIDNVLISGSADQRTVMLDTFSSAPVPQHERSPADAGPVGRIAFDMFM
EDKTSVNEHWLFHDDCTVERFCDSPDGVMLCGSHDGREVYAVTHDLTPTEGWIMQFKI
SVGCKVSEKIAQNQIHVQYSTDFGVSWNYLVPQCLPADPKCSGSVSQPSVFFPTKGWK
RITYPLPESLVGNPVRFRFYQKYSDMQWAIDNFYLGPGCLDNCRGHGDCLREQCICDP
GYSGPNCYLTHTLKTFLKERFDSEEIKPDLWMSLEGGSTCTECGILAEDTALYFGGST
VRQAVTQDLDLRGAKFLQYWGRIGSENNMTSCHRPICRKEGVLLDYSTDGGITWTLLH
EMDYQKYISVRHDYILLPEDALTNTTRLRWWQPFVISNGIVVSGVERAQWALDNILIG
GAEINPSQLVDTFDDEGTSHEENWSFYPNAVRTAGFCGNPSFHLYWPNKKKDKTHNAL
SSRELIIQPGYMMQFKIVVGCEATSCGDLHSVMLEYTKDARSDSWQLVQTQCLPSSSN
SIGCSPFQFHEATIYNSVNSSSWKRITIQLPDHVSSSATQFRWIQKGEETEKQSWAID
HVYIGEACPKLCSGHGYCTTGAICICDESFQGDDCSVFSHDLPSYIKDNFESARVTEA
NWETIQGGVIGSGCGQLAPYAHGDSLYFNGCQIRQAATKPLDLTRASKIMFVLQIGSM
SQTDSCNSDLSGPHAVDKAVLLQYSVNNGITWHVIAQHQPKDFTQAQRVSYNVPLEAR
MKGVLLRWWQPRHNGTGHDQWALDHVEVVLVSTRKLNYMMNFSRQHGLRHFYNRRRRS
LRRYP"
BASE COUNT 880 a 937 c 929 g 886 t
ORIGIN
1 aactttggga gccgccgtct cccgcggaac ttctcggcgg gggcccgctc ccaggcccgc
61 tcccgagccc gttccgctcc cgtccgcctt cttctcgcct tctctccgcg tggctcctcc
121 gtcccggcgt ctccaaaact gaatgagcga gcggcgcgta gggcgcgcgg cggcggcggc
181 ggcggcggcg gcggcggcat ggagcgcagt ggctgggccc ggcagacttt cctcctagcg
241 ctgttgctgg gggcgacgct gagggcgcgc gcggcggctg gctattaccc ccgcttttcg
301 cccttctttt tcctgtgcac ccaccacggg gagctggaag gggatgggga gcagggcgag
361 gtgctcattt ccctgcatat tgcgggcaac cccacctact acgttccggg actagaatca
421 ctctgcctct ccctccttat accaggtccc aagccactcg tttccgttgg catcaaccag
481 ctccttttga caagcagcag acatgggcaa tagataatgt ctatatcggg gatggctgca
541 tagacatgtg cagtggccat gggagatgca tccagggaaa ctgcgtctgt gatgaacagt
601 ggggtggcct gtactgtgat gaccccgaga cctctcttcc aacccaactc aaagacaact
661 tcaatcgagc tccatccagt cagaactggc tgactgtgaa cggagggaaa ttgagtacag
721 tgtgtggagc cgtggcgtcg ggaatggctc tccatttcag tgggggttgt agtcgattat
781 tagtcactgt ggatctaaac ctcactaatg ctgagttcat ccaattttac ttcatgtatg
841 ggtgcctgat tacaccaaac aaccgtaacc aaggtgttct cttggaatat tctgtcaatg
901 gaggcattac ctggaacctg ctcatggaga ttttctatga ccagtacagt aagcccggat
961 ttgtgaatat ccttctccct cctgatgcta aagagattgc cactcgcttc cgctggtggc
1021 agccaagaca tgacggcctg gatcagaacg actgggccat tgacaatgtc ctcatctcag
1081 gctctgctga ccaaaggacc gttatgctgg acaccttcag cagcgcccca gtaccccagc
1141 atgagcgctc ccctgcagat gccggccctg tcgggaggat cgcctttgac atgtttatgg
1201 aagacaaaac ttcagtgaat gagcactggc tattccatga tgattgtaca gtagaaagat
1261 tctgtgactc ccctgatggt gtgatgctct gtggcagtca tgatggacgg gaggtgtatg
1321 cagtgaccca tgacctgact cccactgaag gctggattat gcaattcaag atctcagttg
1381 gatgtaaggt gtctgaaaaa attgcccaga atcaaattca tgtgcagtat tctactgact
1441 tcggtgtgag ttggaattat ctggtccctc agtgcttgcc tgctgaccca aaatgctctg
1501 gaagtgtttc tcagccatct gtattctttc caactaaagg gtggaaaagg atcacctacc
1561 cacttcctga aagcttagtg ggaaatccgg taaggtttag gttctatcag aagtactcag
1621 acatgcagtg ggcaatcgat aatttctacc tgggccctgg atgcttggac aactgcaggg
1681 gccatggaga ttgcttaagg gaacagtgca tctgtgatcc gggatactca gggccaaact
1741 gctacttgac ccacactctg aagactttcc tgaaggaacg ctttgacagt gaagaaatca
1801 aacctgactt atggatgtcc ttagaaggtg gaagtacttg cactgagtgt ggaattcttg
1861 ccgaggacac tgcactctat tttgggggat ccactgtgag acaagcggtt acacaagatt
1921 tggatcttcg aggtgcaaag ttcctgcaat actgggggcg catcggtagt gagaacaaca
1981 tgacctcttg ccatcgtccc atctgccgga aggaaggcgt gctgttggac tactctaccg
2041 atggaggaat tacctggact ttgctccatg agatggatta ccagaaatac atttctgtta
2101 gacacgacta catacttctt cctgaagatg ccctcaccaa cacaactcga cttcgctggt
2161 ggcagccttt tgtgatcagc aatggaattg tggtctctgg ggtggagcgt gctcagtggg
2221 cactggacaa cattttgatt ggtggagcag aaatcaatcc cagccaattg gtggacactt
2281 ttgatgatga aggcacttcc catgaagaaa actggagttt ttaccctaat gctgtaagga
2341 cagcaggatt ttgtggcaat ccatcctttc acctctattg gccaaataaa aagaaggaca
2401 agactcacaa tgctctctcc tcccgagaac tcattataca gccaggatac atgatgcagt
2461 ttaaaattgt ggtgggttgt gaagccactt cttgtggtga ccttcattcc gtaatgctgg
2521 aatacactaa ggatgcaaga tcggattcct ggcagctcgt acagacccag tgccttcctt
2581 cctcttctaa cagcattggc tgctcccctt tccagttcca tgaagccacc atctacaact
2641 ctgtcaacag ctcaagctgg aaaagaatca ccatccagct gcctgaccat gtctcctcta
2701 gtgcaacaca gttccgctgg atccagaagg gagaagaaac tgagaagcaa agctgggcaa
2761 ttgaccacgt gtacattgga gaggcttgcc ccaagctctg cagcgggcac ggatactgca
2821 cgaccggtgc catctgcatc tgcgacgaga gcttccaagg tgatgactgc tctgttttca
2881 gtcacgacct tcccagttat attaaagata attttgagtc cgcaagagtc accgaggcaa
2941 actgggagac cattcaaggt ggagtcatag gaagtggctg tgggcagctg gccccctacg
3001 cccatggaga ctcactgtac tttaatggct gtcagatcag gcaagcagct accaagcctc
3061 tggatctcac tcgagcaagc aaaatcatgt ttgttttgca aattgggagc atgtcgcaga
3121 cggacagctg caacagtgac ctgagtggcc cccacgctgt ggacaaggca gtgctgctgc
3181 aatacagcgt caacaacggg atcacctggc atgtcatcgc ccagcaccag ccaaaggact
3241 tcacacaagc tcagagagtg tcttacaatg tccccctgga ggcacggatg aaaggagtct
3301 tactgcgctg gtggcaacca cgccacaatg gaacaggtca tgatcaatgg gctttggacc
3361 atgtggaggt cgtcctagta agcactcgca aactaaatta catgatgaat ttttcacgac
3421 aacatgggct cagacatttc tacaacagaa gacgaaggtc acttaggcga tacccatgaa
3481 gaatcaaaaa gtttattttt tttcttccaa catgtgatgt gttgctctcc attcttttaa
3541 atctcgcact acatctgata tcaggaaata tctgtgaagg acttggtgat tacctgaaag
3601 cccttctcaa gaccgagtgt acaccacttt cc
//