LOCUS AK293809 2507 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56863 complete cds.
ACCESSION AK293809
VERSION AK293809.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2507)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2507
/clone="BRACE3012047"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488433"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 5..2218
/codon_start=1
/protein_id="BAG57216.1"
/transl_table=1
/translation="MPRGSRARGSKRKRSWNTECPSFPGERPLQVRRAGLRTAGAAAS
LSEAWLRCGEGFQNTSGNPSLTAEEKTITEKHLELCPRPKQETTTSKSTSGLTDITWS
SSGSDLSDEDKTLSQLQRDELQFIDWEIDSDRAEASDCDEFEDDEGAVEISDCASCAS
NQSLTSDEKLSELPKPSSIEILEYSSDSEKEDDLENVLLIDSESPHKYHVQFASDARQ
IMERLIDPRTKSTETILHTPQKPTAKFPRTPENSAKKKLLRGGLAERLNGLQNRERSA
ISLWRHQCISYQKTLSGRKSGVLTVKILELHEECAMQVAMCEQLLGSPATSSSQSVAP
RPGAGLKVLFTKETAGYLRGRPQDTVRIFPPWQKLIIPSGSCPVILNTYFCEKVVAKE
DSEKTCEVYCPDIPLPRRSISLAQMFVIKGLTNNSPEIQVVCSGVATTGTAWTHGHKE
AKQRIPTSTPLRDSLLDVVESQGAASWPGAGVRVVVQRVYSLPSRDSTRGQQGASSGH
TDPAGTRACLLVQDACGMFGEVHLEFTMSKARQLEGKSCSLVGMKVLQKVTRGRTAGI
FSLIDTLWPPAIPLKTPGRDQPCEEIKTHLPPPALCYILTAHPNLGQIDIIDEDPIYK
LYQPPVTRCLRDILQMNDLGTRCSFYATVIYQKPQLKSLLLLEQREIWLLVTDVTLQT
KEERDPRLPKTLLVYVAPLCVLGSEVLEALAGAAPHSLFFKDALRDQGVLASPQL"
BASE COUNT 689 a 618 c 634 g 566 t
ORIGIN
1 ggagatgccc cgcggcagcc gcgctcgggg ctctaagaga aaaaggagtt ggaatacaga
61 atgcccatcc tttccaggag aaagaccact gcaggtcaga agagcaggtc tcaggacagc
121 aggggcagct gcctctctct ctgaagcatg gctcaggtgt ggagaagggt ttcagaacac
181 ttctgggaat ccgtcattaa cagctgaaga gaagacgatt acagaaaagc accttgaatt
241 atgccctaga cccaagcaag aaaccaccac atctaaaagc accagtgggc ttacagacat
301 aacatggagc tccagtggaa gtgatttgtc ggatgaagat aagacacttt ctcagttaca
361 gagagatgaa ttacagttta tcgactggga gattgacagt gacagggcag aggctagtga
421 ctgtgatgaa tttgaagatg acgagggtgc tgtggaaatc tcagactgtg cttcttgtgc
481 aagtaatcag tctttgacaa gtgatgagaa gctgtcggag cttcccaagc caagttctat
541 agaaatttta gagtattcat cagatagtga aaaagaagat gatttggaaa atgtcctact
601 cattgattca gaatcccctc acaaatacca cgtgcagttt gcatcggatg caagacagat
661 tatggagaga ctgatagatc caaggacaaa atcaacagag accattttgc atacacctca
721 gaaacccaca gctaagtttc ccaggactcc agaaaattca gcaaagaaga agcttttaag
781 aggtggacta gcagaaagac taaatggact gcagaatcga gagaggtctg ctatttcttt
841 gtggagacat caatgtattt cttaccaaaa gacactttca ggtagaaaat ctggtgtatt
901 aactgtgaaa attttagagc tgcatgagga atgtgccatg caagttgcca tgtgtgagca
961 gttattgggg tcaccagcca ccagctcctc ccaaagtgtg gctcccaggc ctggagctgg
1021 cctgaaagtt ctcttcacca aggagactgc aggctacctc aggggccgtc cccaggacac
1081 tgtccggatc ttccctccct ggcaaaaact gattattcca agtggaagtt gccctgttat
1141 tctgaatact tacttttgtg agaaagttgt tgccaaagaa gattcagaaa aaacttgtga
1201 agtgtactgt ccggacatac cccttccaag aagaagcatc tctttggccc agatgtttgt
1261 aattaagggt ctaacaaata attcacctga aatccaggtt gtgtgtagtg gtgtagccac
1321 tacagggaca gcctggaccc atgggcacaa agaagcaaaa cagcgcatcc caaccagcac
1381 tcccctgagg gattctctcc tggatgtggt ggaaagccag ggagctgcct cgtggccagg
1441 agctggagtc cgagtggtgg tgcaaagagt gtattctctt cccagcagag acagcaccag
1501 gggtcagcag ggggccagct caggacacac agacccagct ggaactcgag cctgccttct
1561 ggtacaagat gcctgtggaa tgttcggtga agtgcacttg gagttcacca tgtcgaaggc
1621 aagacagttg gaagggaagt cttgcagcct ggtgggaatg aaggttctac agaaagtcac
1681 cagaggaagg acagcgggga ttttcagttt gattgacacc ctgtggcccc cagcgatacc
1741 tctgaaaaca cctggccgcg accagccctg tgaagagata aaaactcatc tgcctcctcc
1801 agccttgtgt tacatcctca cagctcatcc aaatctggga caaattgata taattgacga
1861 agaccccatt tataagcttt accagcctcc agttacccgc tgcttaagag acattctcca
1921 gatgaatgat cttggtaccc gttgcagttt ctatgccacg gtgatttacc aaaaaccaca
1981 gctgaagagt ctgctgcttc tggagcaaag ggagatctgg ctgctagtga ccgatgtcac
2041 tctgcaaacg aaggaggaga gagaccccag gctccccaaa accctgctgg tctatgtggc
2101 ccccttgtgt gtgctgggct ctgaagtcct ggaggcactc gctggggctg cccctcacag
2161 cctcttcttc aaggacgctc tccgtgacca gggtgtgctt gcgtctccac agctttgatg
2221 caggggcgac tgatccgtgc ccatagaata cctcttgtgg cctctggatg cctccttgtt
2281 gcttggacgc tgccggcacc ttcacggagc ccatcacaga catggcccat gtaccagcct
2341 ccagccttca ctgaccctgt agcagccacc tgggcagaac cagctccatg gagatgctgt
2401 gctcactcca gaattgcctg ctggtggcac cccatactgc tgcagactcc acaaacaaac
2461 caaaagctag aatattataa atgcgtatac ttagatcagc cagcccc
//