LOCUS AK293806 1818 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58452 complete cds, weakly similar to
Liprin-alpha.
ACCESSION AK293806
VERSION AK293806.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1818)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1818
/clone="BRACE3011461"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488430"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 234..1415
/codon_start=1
/note="weakly similar to Liprin-alpha"
/protein_id="BAG57213.1"
/transl_table=1
/translation="MGFGSISRVFARGKQRKSLDPGLFDDSDSQCSPTRQSLSLSEGE
EQMDRLQQVELVRTTPMSHWKAGTVQAWLEVVMAMPMYVKACTENVKSGKVLLSLSDE
DLQLGLGVCSSLHRRKLRLAIEDYRDAEAGRSLSKAAELDHHWVAKAWLNDIGLSQYS
QAFQNHLVDGRMLNSLMKRDLEKHLNVSKKFHQVSILLGIELLYQVNFSREALQERRA
RCETQNIDPVVWTNQRVLKWVRDIDLKEYADNLTNSGVHGAVLVLEPTFNAEAMATAL
GIPSGKHILRRHLAEEMSAVFHPANSTGIREAERFGTPPGRASSVTRAGKEENSSGLK
YKAGRLPLGKIGRGFSSKDPDFHDDYGSLQNEDCGDDDPQSRLEQCRLEGYNSLEVTN
V"
BASE COUNT 412 a 556 c 561 g 289 t
ORIGIN
1 aagcggtcag ggtgagcccc tgccactccc ggcagccctc tgtcatctcc gacgcatctg
61 ccgccgaagg cgaccggtcg tccacaccga gcgacatcaa ctcccctcga caccggacac
121 actccctctg caacggcgac agtcccggcc cagttcagaa gaacctgcac aaccctattg
181 tacagtcact agaggatctt gaagaccaaa aacggaaaaa gaagaaagag aagatgggat
241 tcggctccat ctcccgcgtc ttcgccagag ggaagcagcg gaagtccctc gaccccggcc
301 tctttgatga ctcggacagc cagtgcagcc ccacgcggca gagcctcagc ctgtcggaag
361 gcgaggagca gatggaccgg ctgcagcagg tggagctggt gaggaccacc cctatgtccc
421 actggaaggc gggcaccgtc caggcctggc tggaggtggt gatggccatg cctatgtacg
481 tcaaggcctg cacggagaac gtgaagagcg ggaaggtgct gctgagcctg agtgacgagg
541 acctgcagct gggccttggg gtgtgcagct ccctgcaccg gcgcaagctg cgcctggcca
601 tcgaggacta ccgtgatgcc gaggcaggcc gcagcctgtc caaagctgcc gagctggacc
661 atcactgggt ggccaaggcc tggctgaatg acattggcct gtcccagtac tcccaggcct
721 ttcagaacca cctggttgat gggcggatgc tgaattccct gatgaagcga gacctggaga
781 agcacctgaa cgtgtccaag aagttccacc aggtcagcat cctgctgggg atcgagctgc
841 tgtaccaagt gaacttcagc agggaggccc tccaggagcg ccgggcccgc tgcgagacgc
901 agaacattga ccccgtggtg tggaccaacc agcgggtgct caagtgggtt cgagacatcg
961 acctgaagga gtacgcagac aacctgacca acagcggcgt ccatggtgct gtgctggtgc
1021 tggagcccac attcaatgcc gaggccatgg ccactgccct gggcatcccc agtgggaagc
1081 acatcctccg gagacacctg gcagaggaga tgagcgccgt cttccaccca gccaactcca
1141 caggcatccg ggaggctgag cgttttggaa cgccccctgg cagggcctcc agcgtcacgc
1201 gggcaggaaa ggaggagaac agcagcggtc tcaagtacaa ggctggccgg ctgcccctgg
1261 ggaagatagg aaggggcttc agcagcaaag atcccgattt ccatgatgac tatggctctc
1321 ttcaaaacga agattgcgga gacgatgacc cccagagcag gctggaacag tgccgtctgg
1381 aaggctacaa cagcctggag gtcaccaacg tgtaaggaac tggtggctcc accagaccca
1441 acgtgagaga cccaggaagg aagagaagcc agatggcccc aggtgtcgtt ctcactgtac
1501 atagcggccg caggctgagg atgtcccttg ctcctgggca aaatcccgat ggactctgcg
1561 gtttcagctc cacagcgccc aggagagaga agacaccagc ccacctgtct tgggtgggcc
1621 atggactttc ctgttcagct ggagatgggc ccagaggacc tgtcacagtg tccggccctg
1681 cctccatcca ggatacacag gctccacctc agagtgaccg tcactgtgga gcagccaagc
1741 agtccctgga gccttaaacg gagctgccaa ggtgggagga ggcccacagt tccctaaaac
1801 acccttccgg cgggagca
//