LOCUS AK293781 3085 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59484 complete cds, highly similar to Nuclear
envelope pore membrane protein POM 121.
ACCESSION AK293781
VERSION AK293781.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3085)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3085
/clone="BRACE3008029"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488405"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 323..2902
/codon_start=1
/note="highly similar to Nuclear envelope pore membrane
protein POM 121"
/protein_id="BAG57196.1"
/transl_table=1
/translation="MSSLTGAYTSGIPSSSRNAITSSYSSTRGISQLWKRNGPSSSPF
SSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADKESQGEKAADTTPRKKQNSNSQ
STPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQWFNQALED
KSDAASNSVTETPPTTQPSFTFTLPAAATASPPTSLLAPSTNPLLESLKKMQTPPSLP
PCPESAGAATTEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFDSKPPTTLLGLIPAPS
MVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASSAPPM
FKPIFTAPPKSEKEGPTPPGPSVSATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASVP
LPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSV
SSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPALPTTTTVTTFSQ
SLPTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSP
LPSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAPAPATAPTPAPASTI
KIVPAHVPTPIQPTFGGATHSAFGLKATASAFGAPASSQPAFGGSTAVFSFGAATSSG
FGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSATTGAFSFG
AGQSGSTATSTPFTGGLGQNALGTTGQSTPFAFNVGSTTESKPVFGGTATPTFGQNTP
APGVGTSGSSLSFGASSAPAQGFVGVGPFGSAAPSFSIGAGSKTPGARQRLQARRQHT
REK"
BASE COUNT 657 a 1136 c 717 g 575 t
ORIGIN
1 gataccagag cagataatca gctcaacact gtcgtcacca tcaagtaatg ccccagaccc
61 atgtgcaaag gagactgtac tgagtgccct caaagagaag aagaagaaaa ggacagtgga
121 ggaagaagac caaatattcc ttgatggcca ggaaaataaa agaaggcgcc atgatagcag
181 tggcagtgga cattcagcat ttgagcccct ggtggccagt ggagtccccg cttcttttgt
241 gcctaagcct gggtctctga agagaggcct caattctcag agctcagatg accacttgaa
301 taagagatcc cgaagctctt ccatgagctc cttgacaggc gcttacacaa gtggcatccc
361 tagctccagc cgcaatgcca ttaccagttc ctacagctcc actcgaggca tctcacagct
421 gtggaagaga aatggcccca gttcatcacc cttctctagc ccagcctcat cccgctccca
481 gacaccggag aggccagcaa agaaaataag agaagaagag ctgtgtcatc attccagttc
541 ttcaactcca ttggcagcag acaaggagtc ccagggagaa aaggctgcag atacaacccc
601 aaggaagaaa caaaactcga attctcagtc tacacctggc agctctgggc agcgtaagcg
661 gaaagttcag ctgctgcctt ctcggcgagg ggaacagctg accttgcctc cacctcccca
721 gcttggctat tcgatcactg ccgaggacct agacttagag aagaaggctt cattacagtg
781 gttcaaccag gccttggagg acaagagtga tgctgcctcg aactctgtca ctgagacccc
841 acctaccact cagccttcat ttacctttac cctgcctgct gctgcaactg cctccccacc
901 cacctccctc ctggccccaa gcaccaaccc actgttagag agcttgaaga agatgcagac
961 tcccccgagc ctgccaccct gcccagaatc tgctggagca gcaaccactg aggccctctc
1021 acctccaaag acacccagcc tcctaccccc gctgggttta tcacagtcag ggccgccagg
1081 gctgctcccc agcccctcct ttgactccaa acccccgacc actttgctgg ggctgatccc
1141 tgctccatcc atggtaccag ccactgacac caaggcacct ccaacccttc aggcagagac
1201 ggctaccaaa ccccaagcca catctgcccc gtcccccgcc cccaagcaaa gcttcctgtt
1261 tggaacacag aacacctcac cttccagccc tgccgcccct gctgcatctt cagcacctcc
1321 catgttcaag cccattttca cggctccacc caagagtgag aaggaaggcc ccacaccgcc
1381 tggcccttca gtctcagcca cagcgccctc cagctcctcc ctccccacga ccaccagcac
1441 cacagccccg accttccagc ctgtctttag cagcatgggg ccacctgcat ctgtgccctt
1501 gcctgctccc ttcttcaagc agacaactac tcccgccact gctcccacca caactgcccc
1561 gctcttcact ggcctggcca gcgccacctc tgctgtggct cccatcacct ctgccagtcc
1621 atccacagac tctgcttcga agcctgcgtt tggctttggc ataaacagtg tgagcagcag
1681 cagtgtgagt accacgacca gcaccgccac tgccgcctca cagcctttcc tcttcggggc
1741 gccccaggcc tctgctgcca gcttcacccc ggccatgggc tccatattcc agtttggcaa
1801 acctcctgcc ttgcccacaa ccaccacagt caccaccttc agccagtccc tgcccactgc
1861 cgtgccaacg gccaccagca gcagcgctgc cgactttagt ggttttggca gcaccctcgc
1921 cacctccgcc ccggccacca gcagccagcc cactctgacg ttcagtaaca cgagcacccc
1981 cacgttcaac attccctttg gctcaagcgc caagtccccg ctcccatcat atccgggagc
2041 taacccccag cccgcatttg gggccgctga ggggcagcca ccgggggccg ccaagccagc
2101 ccttaccccc agctttggca gctctttcac ttttggaaac tctgcagccc cggccccggc
2161 tactgcaccc acacctgcac ctgcgtccac gatcaagatc gtgcctgcgc acgtgcctac
2221 gcccatccag cctacctttg gcggtgccac gcactcggcg tttggattga aagccacggc
2281 ttccgccttc ggcgctcccg ccagctcaca gcccgccttt ggcggctcca ctgctgtctt
2341 ctccttcggt gcagccacca gctccggctt tggagccacc acccagaccg ccagcagcgg
2401 gagcagcagc tcggtgtttg gcagcacaac accatcaccc ttcacgtttg ggggttcggc
2461 agcccccgct ggcagtggga gctttgggat caacgtggcc accccaggct ccagcgccac
2521 caccggagct ttcagctttg gagcaggaca gagtgggagc acagccacct ccaccccctt
2581 cacagggggc ttaggtcaga acgccctggg caccaccggc cagagcacac cgtttgcctt
2641 caacgtgggc agcacaactg agagcaaacc tgtgtttgga ggcaccgcca cccccacctt
2701 tggtcagaac acccctgcgc ctggagtggg cacatcgggc agcagcctct cctttggggc
2761 atcttcagca cccgcccaag gctttgttgg tgttggaccg ttcggatcgg cggccccttc
2821 attttccatt ggtgcgggat ccaagacccc aggggctcga cagcgactgc aggcccgaag
2881 gcagcacacc cgcgaaaagt agcctttgtc ccctgtccct gttcccccca ccccttccct
2941 aaatctggac cttggcacgt gctagaaaga gccttggacc cttccagctg cgtaaagcaa
3001 acctaccccg gatctctggc ttcagccgcc agggggcagt ggcagccctg gggccctttc
3061 ccttctggag gaagcacaag cctca
//