LOCUS AK293773 4090 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56627 complete cds, highly similar to Homo
sapiens papilin, proteoglycan-like sulfated glycoprotein (PAPLN),
mRNA.
ACCESSION AK293773
VERSION AK293773.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4090)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4090
/clone="BRACE3006853"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488397"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 143..3811
/codon_start=1
/note="highly similar to Homo sapiens papilin,
proteoglycan-like sulfated glycoprotein (PAPLN), mRNA"
/protein_id="BAG57189.1"
/transl_table=1
/translation="MRLPQAEMRLLLLVPLLLAPAPGSSAPKVRRQSDTWGPWSQWSP
CSRTCGGGVSFRERPCYSQRRDGGSSCVGPARSHRSCRTESCPDGARDFRAEQCAEFD
GAEFQGRRYRWLPYYSAPNKCELNCIPKGENFYYKHREAVVDGTPCEPGKRDVCVDGS
CRVVGCDHELDSSKQEDKCLRCGGDGTTCYPVAGTFDANDLSRGYNQILIVPMGATSI
LIDEAAASRNFLAVKNVRGEYYLNGHWTIEAARALPAASTILHYERGAEGDLAPERLH
ARGPTSEPLVIELISQEPNPGVHYEYHLPLRRPSPGFSWSHGSWSDCSAECGGGHQSR
LVFCTIDHEAYPDHMCQRQPRPADRRSCNLHPCPETKRWKAGPWAPCSASCGGGSQSR
SVYCISSDGAGIQEAVEEAECAGLPGKPPAIQACNLQRCAAWSPEPWGECSVSCGVGV
RKRSVTCRGERGSLLHTAACSLEDRPPLTEPCVHEDCPLLSDQAWHVGTWGLCSKSCS
SGTRRRQVICAIGPPSHCGSLQHSKPVDVEPCNTQPCHLPQEVPSMQDVHTPASNPWM
PLGPQESPASDSRGQWWAAQEHPSARGDHRGERGDPRGDQGTHLSALGPAPSLQQPPY
QQPLRSGSGPHDCRHSPHGCCPDGHTASLGPQWQGCPGAPCQQSRYGCCPDRVSVAEG
PHHAGCTKSYGGDSTGGMPRSRAVASTVHNTHQPQAQQNEPSECRGSQFGCCYDNVAT
AAGPLGEGCVGQPSHAYPVRCLLPSAHGSCADWAARWYFVASVGQCNRFWYGGCHGNA
NNFASEQECMSSCQGSLHGPRRPQPGASGRSTHTDGGGSSPAGEQEPSQHRTGAAVQR
KPWPSGGLWRQDQQPGPGEAPHTQAFGEWPWGQELGSRAPGLGGDAGSPAPPFHSSSY
RISLAGVEPSLVQAALGQLVRLSCSDDTAPESQAAWQKDGQPISSDRHRLQFDGSLII
HPLQAEDAGTYSCGSTRPGRDSQKIQLRIIGGDMAVLSEAELSRFPQPRDPAQDFGQA
GAAGPLGAIPSSHPQPANRLRLDQNQPRVVDASPGQRIRMTCRAEGFPPPAIEWQRDG
QPVSSPRHQLQPDGSLVISRVAVEDGGFYTCVAFNGQDRDQRWVQLRVLGELTISGLP
PTVTVPEGDTARLLCVVAGESVDIRWSRNGLPVQADGHRVHQSPDGTLLIYNLRARDE
GSYTCSAYQGSQAVSRST"
BASE COUNT 724 a 1343 c 1315 g 708 t
ORIGIN
1 gtgttctctg cggtgcaccg aggcgcaccc ggctgtcctg ttgcgggtct cctggtcacc
61 tgtgggccat agggagagac gcgcccacac actctcgccc gcgcccagga cagctgcggg
121 agccccgggc cgctctaacc caatgcgtct cccgcaggct gagatgcggc tgctcctgct
181 cgtgccgctg ctgctggctc cagcgcccgg gtcctcggct cccaaggtga ggcggcagag
241 tgacacctgg ggaccctgga gccagtggag cccctgcagc cggacctgtg gagggggtgt
301 cagcttccgg gagcgcccct gctactccca gaggagagat ggaggctcca gctgcgtggg
361 ccccgcccgg agccaccgct cttgtcgcac ggagagctgc cccgacggcg cccgggactt
421 ccgggccgag cagtgcgcgg agttcgacgg agcggagttc caggggcggc ggtatcggtg
481 gctgccctac tacagcgccc caaacaagtg tgaactgaac tgcattccca agggggagaa
541 cttctactac aagcacaggg aggctgtggt tgatgggacg ccctgcgagc ctggcaagag
601 ggatgtctgt gtggatggca gctgccgggt tgtcggctgt gatcacgagc tggactcgtc
661 caagcaggag gacaagtgtc tgcggtgtgg gggtgacggc acgacctgct accccgtcgc
721 aggcaccttt gacgctaatg acctcagccg aggctacaac cagatcctca tagttcccat
781 gggtgccacc agcatcctca tcgacgaggc tgctgccagc aggaacttcc tggctgtgaa
841 gaatgttcgt ggggaatact acctcaatgg gcactggacc atcgaggcgg cccgggccct
901 gccagcagcc agcaccatcc tgcattacga gcggggtgct gagggggacc tggcccctga
961 gcgactccat gcccggggcc ccacctcgga gcccctggtc atcgagctca tcagccagga
1021 gcccaacccc ggtgtgcact atgagtacca cctgcccctg cgccgcccca gccccggctt
1081 cagctggagc cacggctcat ggagtgactg cagcgcggag tgtggcggag gtcaccagtc
1141 ccgcctggtg ttctgcacca tcgaccatga ggcctacccc gaccacatgt gccagcgcca
1201 gccacggcca gctgaccggc gttcctgcaa tcttcaccct tgcccggaga ccaagcgctg
1261 gaaggcaggg ccatgggcac cctgctcagc ctcctgtgga ggaggctccc agtcccgctc
1321 cgtgtactgc atctcgtctg acggggccgg catccaggag gccgtggagg aggctgagtg
1381 tgccgggctg cctgggaagc cccctgccat tcaggcctgt aacctgcagc gctgtgcagc
1441 ctggagcccg gagccctggg gagagtgttc tgtcagttgt ggcgttggcg tccggaagcg
1501 gagcgttact tgccggggtg aaaggggttc tttgctccat accgcagcgt gctccttgga
1561 agaccggcca cctctgactg agccctgtgt gcatgaggac tgccccctcc tcagtgacca
1621 ggcctggcat gttggcacct ggggtctatg ctccaagagc tgcagctcgg gcactcggag
1681 gcgacaggtc atctgtgcca ttgggccgcc cagccactgc gggagcctgc agcactccaa
1741 gcctgtggat gtggagcctt gtaacacgca gccctgtcat ctcccccagg aggtccccag
1801 catgcaggat gtgcacaccc ctgccagcaa cccctggatg ccgttgggcc ctcaggagtc
1861 ccctgcctca gactccagag gccagtggtg ggcagcccag gaacacccct cagccagggg
1921 tgaccacagg ggagaacgag gtgaccccag gggcgaccaa ggcacccacc tgtcagccct
1981 gggccccgct ccctctctgc agcagccccc ataccagcaa cccctgcggt cgggctcagg
2041 gccccacgac tgcagacaca gtcctcacgg gtgctgcccc gatggccaca cggcatctct
2101 cgggcctcag tggcaaggct gccctggggc cccctgtcag cagagcaggt acgggtgctg
2161 ccctgacagg gtatctgtcg ctgaggggcc ccatcacgct ggctgcacaa agtcgtatgg
2221 tggtgacagc accgggggca tgcccaggtc aagggcagtg gcttctacag tccacaacac
2281 ccaccagccc caggcccagc agaatgagcc cagtgagtgc cggggctccc agtttggctg
2341 ttgctatgac aacgtggcca ctgcagccgg tcctcttggg gaaggctgtg tgggccagcc
2401 cagccatgcc taccccgtgc ggtgcctgct gcccagtgcc catggctctt gcgcagactg
2461 ggctgcccgc tggtacttcg ttgcctctgt gggccaatgt aaccgcttct ggtatggcgg
2521 ctgccatggc aatgccaata actttgcctc ggagcaagag tgcatgagca gctgccaggg
2581 atctctccat gggccccgtc gtccccagcc tggggcttct ggaaggagca cccacacgga
2641 tggtggcggc agcagtcctg caggcgagca ggaacccagc cagcacagga caggggccgc
2701 ggtgcagaga aagccctggc cttctggtgg tctctggcgg caagaccaac agcctgggcc
2761 aggggaggcc ccccacaccc aggcctttgg agaatggcca tgggggcagg agcttgggtc
2821 cagggcccct ggactgggtg gagatgccgg atcaccagcg ccacccttcc acagctcctc
2881 ctacaggatt agcttggcag gtgtggagcc ctcgttggtg caggcagccc tggggcagtt
2941 ggtgcggctc tcctgctcag acgacactgc cccggaatcc caggctgcct ggcagaaaga
3001 tggccagccc atctcctctg acaggcacag gctgcagttc gacggatccc tgatcatcca
3061 ccccctgcag gcagaggacg cgggcaccta cagctgtggc agcacccggc caggccgcga
3121 ctcccagaag atccaacttc gcatcatagg gggtgacatg gccgtgctgt ctgaggctga
3181 gctgagccgc ttccctcagc ccagggaccc agctcaggac tttggccaag cgggggctgc
3241 tgggcccctg ggggccatcc cctcttcaca cccacagcct gcaaacaggc tgcgtttgga
3301 ccagaaccag ccccgggtgg tggatgccag tccaggccag cggatccgga tgacctgccg
3361 tgccgaaggc ttcccgcccc cagccatcga gtggcagaga gatgggcagc ctgtctcttc
3421 tcccagacac cagctgcagc ctgatggctc cctggtcatt agccgagtgg ctgtagaaga
3481 tggcggcttc tacacctgtg tcgctttcaa tgggcaggac cgagaccagc gatgggtcca
3541 gctcagagtt ctgggggagc tgacaatctc aggactgccc cctactgtga cagtgccaga
3601 gggtgatacg gccaggctat tgtgtgtggt agcaggagaa agtgtggaca tcaggtggtc
3661 caggaacggg ctacctgtgc aggctgatgg ccaccgtgtc caccagtccc cagatggcac
3721 gctgctcatt tacaacttgc gggccaggga tgagggctcc tacacgtgca gtgcctacca
3781 ggggagccag gcagtcagcc gcagcaccta ggtgaaggtg gtctcaccag cacccaccgc
3841 ccagcccagg gaccctggca gggactgcgt cgaccagcca gagctggcca actgtgattt
3901 gatcctgcag gcccagcttt gtggcaatga gtattactcc agcttctgct gtgccagctg
3961 ttcacgtttc cagcctcacg ctcagcccat ctggcagtag ggatgaaggc tagttccagc
4021 cccagtccaa aatagttcat agggctaggg agaaaggaag atggactctt ggcttcctct
4081 ctctggctgg
//