LOCUS AK293772 3022 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61218 complete cds, highly similar to RRP5
protein homolog.
ACCESSION AK293772
VERSION AK293772.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3022)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3022
/clone="BRACE3006842"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488396"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 117..2432
/codon_start=1
/note="highly similar to RRP5 protein homolog"
/protein_id="BAG57188.1"
/transl_table=1
/translation="MANLEESFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKR
KKSQKGPAKTKKLKIEKRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISL
PNGLQGFVQVTEICDAYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITD
RGKKSVKLSLNPKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLL
KAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLN
NLLPGLVVKAQVQKVTPFGLTLNFLTFFTGVVDFMHLDPKKAGTYFSNQAVRACILCV
HPRTRVVHLSLRPIFLQPGRPLTRLSCQNLGAVLDDVPVQGFFKKAGATFRLKDGVLA
YARLSHLSDSKNVFNPEAFKPGNTHKCRIIDYSQMDELALLSLRTSIIEAQYLRYHDI
EPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGDEVKCRVL
LCDPEAKKLMMTLKKTLIESKLPVITCYADAKPGLQTHGFIIRVKDYGCIVKFYNNVQ
GLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCEPSKERMLLSFKLSSDPEPKKEPAG
HSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNIRAFLPTSHLSDHVANGPLLHHW
LQAGDILHRVLCLSQSEGRVLLRRKPALVSTVEGGQDPKNFSEIHPGMLLIGFVKSIK
DYGVFIQFPSGLSGLAPKAIMCSSCRSRPLD"
BASE COUNT 802 a 744 c 775 g 701 t
ORIGIN
1 acacttccgg aagaattgca ctggactgtg ggtatcctgg tctccgcgtg tgtgagtacc
61 gcggcgcgag gttagtggta gctgggtgca gacgccgtgg cgctggagac ccaaacatgg
121 caaacctgga agaaagcttc ccccgaggag gtacaagaaa gatccacaaa ccagagaaag
181 ctttccagca gtcagttgaa caagacaact tatttgatat ttctactgaa gagggatcca
241 ccaaaagaaa aaagagccag aaggggccag caaaaacaaa aaagttgaaa atcgaaaaga
301 gagaaagcag caagtccgca agagagaagt ttgaaatcct tagtgttgag tccctgtgtg
361 agggaatgcg tattttgggt tgcgtgaaag aggtgaatga actggaactg gtgattagtc
421 tccccaatgg cctccagggc tttgtgcaag tcactgaaat ctgtgatgcc tacaccaaaa
481 agctgaatga gcaggtgaca caagaacaac ctctgaagga cctacttcac ttgcctgaac
541 ttttctcacc tggaatgctg gtaagatgtg tggtgagcag tctgggcatc acagacaggg
601 gcaagaagag tgtcaagctg tctctgaacc ccaaaaatgt caacagagtg ctgagtgctg
661 aggccctgaa gcctggcatg ctacttacag gtaccgtatc cagcctggaa gaccatggct
721 acctagtgga cattggtgtt gatgggacca gagcttttct gccactgctg aaagcccagg
781 agtacatcag acagaagaac aaaggtgcta aactaaaggt gggtcagtac ctgaactgca
841 ttgttgaaaa ggtgaaaggc aacggaggag ttgttagtct gtctgttggt cactcagagg
901 tttctacggc cattgctact gaacagcaga gctggaacct taataacttg ctaccaggac
961 tggtggtcaa agctcaggta cagaaggtga ctccatttgg ccttacgcta aacttcctca
1021 cattcttcac gggcgtggtt gactttatgc acctggatcc caagaaagct ggaacatatt
1081 tctcaaatca ggcagtgagg gcctgcatcc tttgcgtcca tcctcgaacc agagttgtgc
1141 acctgagcct gcgccccatc ttcctacagc ctggacgccc actcacccga ctctcttgcc
1201 agaaccttgg agcagtgctg gatgatgttc ctgtccaggg ttttttcaaa aaggctgggg
1261 ccacctttag gctgaaggat ggggttctgg cctatgcccg gctcagccat ctctctgatt
1321 ctaagaacgt cttcaatcct gaggccttca agccagggaa cactcacaag tgtagaatta
1381 ttgactacag ccaaatggat gaactggcct tgctctctct acgaacgtct attattgaag
1441 ctcagtacct tagatatcat gacatcgaac ctggggcagt ggtaaagggc acagtgctaa
1501 ccataaagtc atatgggatg ctggtgaagg tgggcgagca gatgaggggc ctggtacctc
1561 ccatgcacct ggctgacatc ctgatgaaga atccggagaa gaagtaccac atcggggatg
1621 aggtcaagtg ccgggttttg ctttgtgacc ctgaagccaa gaagctgatg atgaccctga
1681 aaaaaaccct gattgagtcc aaactacctg tcattacctg ctatgccgat gccaagcctg
1741 gtctgcagac acatggcttc atcatcaggg tcaaggacta tggctgcatt gtgaagttct
1801 acaacaatgt gcagggactg gtgcccaagc atgagctcag tactgagtat atccctgacc
1861 cggagagagt tttttacact ggccaggtgg tgaaggttgt cgtattgaac tgtgagccat
1921 ccaaagagag gatgctctta tccttcaagc tgtcgagtga tccagagcca aagaaagagc
1981 ctgcaggaca cagtcagaag aaaggaaaag ccattaacat tgggcagttg gtagatgtga
2041 aggttttaga gaagaccaaa gatgggctgg aggtggctgt cctgccccac aacatccgtg
2101 ctttcctccc cacatctcat ctgtcggacc acgttgccaa cggcccattg ttacatcatt
2161 ggctccaggc aggtgacatc cttcaccgag tcctgtgtct gagccagagc gaggggcgtg
2221 ttcttcttcg caggaagcca gccttggtct ccacagtaga aggtggccag gatcccaaga
2281 acttctcaga aatccatcct ggaatgttgc tcattggttt tgtgaagagc atcaaggact
2341 atggcgtgtt catccagttc ccctcaggtc ttagcggact ggccccaaaa gctatcatgt
2401 gctcgagctg caggtcgcgg ccgctagact agtctagaga aaaaacctcc cacacctccc
2461 cctgaacctg aaacataaaa tgaatgcaat tgttgttgtt aacttgttta ttgcagctta
2521 taatggttac aaataaagca atagcatcac aaatttcaca aataaagcat ttttttcact
2581 gcattctagt tgtggtttgt ccaaactcat caatgtatct tatcatgtct ggatccccgg
2641 gtaccgagct cgaattaatt cctcttccgc ttcctcgctc actgactcgc tgcgctcggt
2701 cgttcggctg cggcgagcgg tatcagctca ctcaaaggcg gtaatacggt tatccacaga
2761 atcaggggat aacgcaggaa agaacatgtg agcaaaaggc cagcaaaagg ccaggaaccg
2821 taaaaaggcc gcgttgctgg cgtttttcca taggctccgc ccccctgacg agcatcacaa
2881 aaatcgacgc tcaagtcaga ggtggcgaaa cccgacagga ctataaagat accaggcgtt
2941 tccccctgga agctccctcg tgcgctctcc tgttccgacc ctgccgctta ccggatacct
3001 gtccgccttt ctcccttcgg ga
//