LOCUS AK293766 1604 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54980 complete cds, highly similar to Homo
sapiens chloride channel, calcium activated, family member 4
(CLCA4), mRNA.
ACCESSION AK293766
VERSION AK293766.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1604)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1604
/clone="BRACE3006273"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488390"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 561..1274
/codon_start=1
/note="highly similar to Homo sapiens chloride channel,
calcium activated, family member 4 (CLCA4), mRNA"
/protein_id="BAH11591.1"
/transl_table=1
/translation="MVTPPPPPVFSLLKISQRIVCLVLDKSGSMGGKDRLNRMNQAAK
HFLLQTVENGSWVGMVHFDSTATIVNKLIQIKSSDERNTLMAGLPTYPLGGTSICSGI
KYAFQVIGELHSQLDGSEVLLLTDGEDNTASSCIDEVKQSGAIVHFIALGRAADEAVI
EMSKITGGSHFYVSDEAQNNGLIDAFGALTSGNTDLSQKSLQVRVLIPWVFMFTFATR
KNHLVVISFEFHIFLKVNF"
BASE COUNT 540 a 296 c 321 g 447 t
ORIGIN
1 gtgccagaag atgaaaaaat aattgaacaa atagaggata tggtgactac agcttctacg
61 tacctgtttg aagccacaga aaaaagattt tttttcaaaa atgtatctat attaattcct
121 gagaattgga aggaaaatcc tcagtacaaa aggccaaaac atgaaaacca taaacatgct
181 gatgttatag ttgcaccacc tacactccca ggtagagatg aaccatacac caagcagttc
241 acagaatgtg gagagaaagg cgaatacatt cacttcaccc ctgaccttct acttggaaaa
301 aaacaaaatg aatatggacc accaggcaaa ctgtttgtcc atgagtgggc tcacctccgg
361 tggggagtgt ttgatgagta caatgaagat cagccttcct accgtgctaa gtcaaaaaaa
421 atcgaagcaa caaggttgtt gaattttgta acgaaaaaac ccataatcaa gaagctccaa
481 gcctacaaaa cataaagtgc aattttagaa gtacatggga ggtgattagc aattctgagg
541 attttaaaaa caccataccc atggtgacac cacctcctcc acctgtcttc tcattgctga
601 agatcagtca aagaattgtg tgcttagttc ttgataagtc tggaagcatg gggggtaagg
661 accgcctaaa tcgaatgaat caagcagcaa aacatttcct gctgcagact gttgaaaatg
721 gatcctgggt ggggatggtt cactttgata gtactgccac tattgtaaat aagctaatcc
781 aaataaaaag cagtgatgaa agaaacacac tcatggcagg attacctaca tatcctctgg
841 gaggaacttc catctgctct ggaattaaat atgcatttca ggtgattgga gagctacatt
901 cccaactcga tggatccgaa gtactgctgc tgactgatgg ggaggataac actgcaagtt
961 cttgtattga tgaagtgaaa caaagtgggg ccattgttca ttttattgct ttgggaagag
1021 ctgctgatga agcagtaata gagatgagca agataacagg aggaagtcat ttttatgttt
1081 cagatgaagc tcagaacaat ggcctcattg atgcttttgg ggctcttaca tcaggaaata
1141 ctgatctctc ccagaagtcc cttcaggtca gagttctcat tccttgggtt ttcatgttca
1201 cttttgccac aagaaaaaac catttggtgg ttataagttt tgagttccat atttttctca
1261 aagtaaattt ttaattaaaa tctaaacttt aatcttaaat agaaattacc cttagctata
1321 gccaaattaa ttggtgaaat aagagtaaaa taaatggtga aacagcagac atactgtttc
1381 ttttcctatt gccatgggtt tggttaagaa atgacattac aatgttataa tgtcaaattt
1441 ttcaccaaaa atggaccttt tccaaaataa agcacccatt tttcaatgaa tgcattttaa
1501 aagctcatgc ttccaagctt tccccatgct taacttctat gatatagatt tagaaacatg
1561 aactcaagaa cctggctggg aaatggaagg agtgtatctt ggaa
//