LOCUS AK293748 3990 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56056 complete cds.
ACCESSION AK293748
VERSION AK293748.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3990)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3990
/clone="BRACE3003842"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488372"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 97..3816
/codon_start=1
/protein_id="BAG57170.1"
/transl_table=1
/translation="MTIWQMQKQAQRGSPARTHSMMSLSVRPQRRLLSARVNRSQSFA
GVLGSHERGPRSFPVFSPPGPPRKPPALSRVSRMFSVAHPAAKVPQPERLDLVYTALK
RGLTAYLEVHQQEQEKLQGQIRESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKID
ELYEAYCAQRRLRDGAYNMVRAYTTGSPGSREARDSLAEATRGHREYTESMCLLESEL
EAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIEGSGKQVWDSEETIF
LPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEV
TWSPFDKDDQPSAASSVNKASTVTKRFSTYSQSPPDTPSLREQAFYNMLRRQEELENG
TAWSLSSESSDDSSSPQLSGTARHSPAPRPLVQQPEPLPIQVAFRRPETPSSGPLDEE
GAVAPVLANGHAPYSRTLSHISEASVDAALAEASVEAVGPESLAWGPSPPTHPAPTHG
EHPSPVPPALDPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELPGPTH
TTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIISTLTTTGPTLNIIGPVQTTTSPTHT
MPSPTHTTASPTHTSTSPTHTPTSPTHKTSMSPPTTTSPTPSGMGLVQTATSPTHPTT
SPTHPTTSPILINVSPSTSLELATLSSPSKHSDPTLPGTDSLPCSPPVSNSYTQADPM
APRTPHPSPAHSSRKPLTSPAPDPSESTVQSLSPTPSPPTPTPQHSDLCLAMAVQTPV
PTAAGGSGDRSLEEALGALMAALDDYRGQFPELQGLEQEVTRLESLLMQRQGLTRSRA
SSLSITVEHALESFSFLNEDEDEDNDVPGDRPPSSPEAGAEDSIDSPSARPLSTGCPA
LDAALVRHLYHCSRLLLKLGTFGPLRCQEAWALERLLREARVLEAVCEFSRRWEIPAS
SAQEVVQFSASRPGFLTFWDQCTERLSCFLCPVERVLLTFCNQYGARLSLRQPGLAEA
VCVKFLEDALGQKLPRRPQPGPGEQLTVFQFWSFVETLDSPTMEAYVTETAEEVLLVR
NLNSDDQAVVLKALRLAPEGRLRRDGLRALSSLLVHGNNKVMAAVSTQLRSLSLGPTF
RERALLCFLDQLEDEDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSL
QQCGEEGQSAHRRLEESLDALPRIFGPGSMASTAF"
BASE COUNT 820 a 1345 c 1083 g 742 t
ORIGIN
1 agcctcgtgt aacaatactt gtgccctggc tgcagtctgc ggggccgcgc cctgggcctg
61 ccgcattcgg ccaacgcaca gcatctgagg agggttatga ccatctggca gatgcagaaa
121 caggcccaga gagggagccc cgcgcggact cactctatga tgtccctgtc ggtgcggccg
181 cagcgccgtc tgctcagcgc ccgggtcaat aggagccagt ccttcgcagg cgtcctcggc
241 agccacgagc gggggcccag gagtttcccg gtcttcagcc cgccggggcc cccacggaag
301 ccccccgcgc tctcccgagt gtccaggatg ttttccgtgg ctcacccagc cgccaaggtg
361 ccgcagcccg agcggctgga cctggtgtac acggcgctga agcggggcct gacggcctac
421 ttggaagtgc accagcagga gcaagagaaa ctccaggggc agataaggga gtccaagagg
481 aattcccgct tgggcttcct gtatgatctg gacaagcaag tcaagtccat tgaacgcttc
541 ctgcgacgac tggagttcca tgccagcaag atcgatgagc tgtatgaggc atactgtgcc
601 cagcggcgtc tccgggatgg tgcctacaac atggtccgtg cctacaccac tgggtccccg
661 ggaagccgag aggcccggga cagcctggca gaggccactc gggggcatcg cgagtacacg
721 gagagcatgt gtctgctgga gagcgagctg gaggcacagc tgggcgagtt tcatctccga
781 atgaaagggc tggctggctt cgccaggctg tgtgtaggcg atcagtatga gatctgcatg
841 aaatatgggc gtcagcgctg gaaactacgg ggccgaattg agggtagtgg aaagcaggtg
901 tgggacagtg aagaaaccat ctttctccct ctactcacgg aatttctgtc tattaaggtg
961 acagaactga agggcctggc caaccatgtg gttgtgggca gtgtctcctg tgagaccaag
1021 gacctgtttg ccgccctgcc ccaggttgtg gctgtggata tcaatgacct tggtaccatc
1081 aagctcagcc tggaagtcac atggagcccc ttcgacaagg atgaccagcc ctcagctgct
1141 tcttctgtca acaaggcctc cacagtcacc aagcgcttct ccacctatag ccagagccca
1201 ccggacacac cctcacttcg ggaacaggct ttctataaca tgctgcggcg gcaggaggag
1261 ctggagaatg ggacagcatg gtccctgtca tctgaatctt cagacgactc atccagccca
1321 cagctctcag gcactgcccg ccactcacca gcccctaggc ccctggtgca gcagcccgag
1381 ccccttccca tccaagttgc cttccgcagg cctgagaccc ccagctctgg gcccttggat
1441 gaggaggggg ccgtggcccc agtcctggca aatgggcatg caccctacag tcggactctg
1501 agccacatca gtgaggctag tgtagatgct gccttggctg aggcttcagt ggaggccgtt
1561 ggcccagaaa gcctagcctg gggacctagc ccacctacac acccagctcc cacccatgga
1621 gagcacccca gtcctgttcc tcctgccctg gaccctggcc actctgccac aagctctacc
1681 ctcggtacaa caggctctgt ccccacatct acagaccctg ccccatctgc acacctagac
1741 tcagttcata agtccacaga ctctggccct tcagaactgc caggccccac tcacaccact
1801 acaggctcta cctatagtgc cattaccact acccacagtg ctccaagccc cctcactcac
1861 actactacag gctccaccca caagcccata atctctaccc ttactactac aggccctacc
1921 ctcaatatca taggcccagt ccagactacc acaagcccca cccacactat gccaagccct
1981 acccatacca cagcaagccc cactcatact tccacaagcc ccacccatac ccccacaagt
2041 cccacccaca aaaccagtat gtcacctccc accactacaa gtcctacccc cagtggtatg
2101 ggcctagtcc agactgccac aagtcccacc catcctacca caagccccac ccatcccacc
2161 acaagcccca tccttataaa tgtaagccct tccacttctc tagaacttgc taccctctcc
2221 agcccctcca aacactcaga ccccaccctc ccaggcactg actcccttcc ctgtagtccc
2281 ccagtctcca attcctacac tcaggcagac cctatggccc ccagaactcc ccacccaagt
2341 cctgcccatt ccagtaggaa acccctcaca agccctgccc cagatccctc agagtctacg
2401 gttcagagtc taagccccac tccctcaccc ccaaccccta caccccagca ttcagacctt
2461 tgcctggcca tggctgtcca gaccccagtc ccaacggcag ccggagggtc tggggacagg
2521 agcctggagg aggcactggg ggccctaatg gctgccctgg atgactaccg tggccagttt
2581 cctgagctgc agggcctgga gcaggaggtg acccgcctag aaagtctgct catgcagaga
2641 caaggtctga ctcgcagccg ggcctccagt ctcagcatca ctgtggagca tgccttggag
2701 agcttcagct tcctcaatga agacgaagat gaagacaatg atgttcctgg ggacaggcct
2761 ccaagcagcc cggaggctgg ggctgaggac agcatagact cacccagtgc ccgccccctc
2821 agcacggggt gtccagctct ggatgctgcc ttggtccggc acctgtacca ctgcagtcgc
2881 ctcctgctga aactgggcac atttgggccc ctgcgctgcc aggaggcatg ggccctggag
2941 cggctgctgc gggaagcccg agtactggag gcagtatgcg agttcagcag gcggtgggag
3001 atcccggcca gctctgccca ggaagtggtg cagttctcgg cctctcggcc tggcttcctg
3061 accttctggg accagtgcac agagagactc agctgcttcc tctgcccggt ggagcgggtg
3121 cttctcacct tctgcaacca gtatggtgcc cgcctctccc tgcgccagcc aggcttggct
3181 gaggctgtgt gtgtgaagtt cctggaggat gccctggggc agaagctgcc cagaaggccc
3241 cagccagggc ctggagagca gctcacagtc ttccagttct ggagttttgt ggaaaccttg
3301 gacagcccca ccatggaggc ctacgtgact gagaccgctg aggaggtgct actggtgcgg
3361 aatctgaact cggatgatca ggctgttgtg ctgaaggccc tgagattggc gcccgagggg
3421 cgtctgcgaa gggacgggct gcgggccctc agctccctgc tcgtccatgg caacaacaag
3481 gtcatggctg ctgtcagcac ccagctccgg agcctgtcac tgggccctac cttccgggag
3541 agggccctcc tgtgcttcct ggaccagctg gaggatgagg acgtgcagac tcgagtggct
3601 ggctgcctgg ccctaggctg catcaaggct cccgagggca ttgagcccct ggtgtacctc
3661 tgccaaactg acacagaagc tgtgagggaa gctgcccggc aaagcctaca gcagtgtgga
3721 gaagagggac agtctgccca tcgacggctg gaggagtccc tggacgccct gccccgcatc
3781 tttgggcctg gcagcatggc cagcacagca ttctaaacta ttcacccatg ggttcctggt
3841 gcccctttcc ccccactttc agggctcacc aggcactggc agggagggta agggctggct
3901 ccagataccc ctcccccaca gattcctagc aatgaaaatc taatatattc ttctgttgcc
3961 cctggggttg gagagtcagt gcctgcagtc
//