LOCUS AK293732 3625 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60064 complete cds, highly similar to Homo
sapiens GTPase activating Rap/RanGAP domain-like 3 (GARNL3), mRNA.
ACCESSION AK293732
VERSION AK293732.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3625)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3625
/clone="BRACE3001112"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488356"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 300..3341
/codon_start=1
/note="highly similar to Homo sapiens GTPase activating
Rap/RanGAP domain-like 3 (GARNL3), mRNA"
/protein_id="BAG57158.1"
/transl_table=1
/translation="MVVDFCRRFVARSLCIILMKHFCSSSVSEDLGCRRGDFSRKHYG
SVELLISSDADGAIQRAGRFRVENGSSDENATALPGTWRRTDVHLENPEYHTRWYFKY
FLGQVHQNYIGNDAEKSPFFLSVTLSDQNNQRVPQYRAILWRKTGTQKICLPYSPTKT
LSVKSILSAMNLDKFEKGPREIFHPEIQKDLLVLEEQEGSVNFKFGVLFAKDGQLTDD
EMFSNEIGSEPFQKFLNLLGDTITLKGWTGYRGGLDTKNDTTGIHSVYTVYQGHEIMF
HVSTMLPYSKENKQQVERKRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHIFALVR
YNQQNDNYRLKIFSEESVPLFGPPLPTPPVFTDHQEFRDFLLVKLINGEKATLETPTF
AQKRRRTLDMLIRSLHQDLMPDLHKNMLNRRSFSDVLPESPKSARKKEEARQAEFVRI
GQALKLKSIVRGDAPSSLAASGICKKEPWEPQCFCSNFPHEAVCADPWGQALLVSTDA
GVLLVDDDLPSVPVFDRTLPVKQMHVLETLDLLVLRADKGKDARLFVFRLSALQKGLE
GKQAGKSRSDCRENKLEKTKGCHLYAINTHHSRELRIVVAIRNKLLLITRKHNKPSGV
TSTSLLSPLSESPVEEFQYIREICLSDSPMVMTLVDGPAEESDNLICVAYRHQFDVVN
ESTGEAFRLHHVEANRVNFVAAIDVYEDGEAGLLLCYNYSCIYKKVCPFNGGSFLVQP
SASDFQFCWNQAPYAIVCAFPYLLAFTTDSMEIRLVVNGNLVHTAVVPQLQLVASRSD
IYFTATAAVNEVSSGGSSKGASARNSPQTPPGRDTPVFPSSLGEGEIQSKNLYKIPLR
NLVGRSIERPLKSPLVSKVITPPTPISVGLAAIPVTHSLSLSRMEIKEIASRTRRELL
GLSDEGGPKSEGAPKAKSKPRKRLEESQGGPKPGAVRSSSSDRIPSGSLESASTSEAN
PEGHSASSDQDPVADREGSPVSGSSPFQLTAFSDEDIIDLK"
BASE COUNT 963 a 861 c 861 g 940 t
ORIGIN
1 agcagctttg tcccttgcct caagtttact gcagggcttc tctcctctct ggttatacag
61 aaatgaaatt ataaaccacc agtaaccttg gaaatttcaa tcgattccaa atgactaaat
121 atttaattga atcattgcct atacttccag ggatgactct ggcgtttgct ttttattgag
181 ggctccatga aagccaggct ctgcaatggc tgctggggac tgtgtctgtt gcaaggaggc
241 tcccctgcag tgaggagccg gggcactgca agtctgttcc atagcagtcc tttttgcaaa
301 tggtagttga tttttgcaga aggtttgtgg ccagatcgct atgtataata ctgatgaagc
361 atttttgttc cagctctgtc tcggaagacc taggctgtag acgtggggat ttcagtagga
421 aacattatgg atctgtggag ctgcttattt ccagtgatgc tgatggagcc atccaaaggg
481 ctggaagatt cagagtggaa aatggctctt cagatgagaa tgcaactgcc ctgcctggta
541 cttggcgaag aacagacgtg cacttagaga acccagaata ccacaccaga tggtatttca
601 aatatttttt aggacaagtc catcagaact acattggaaa cgatgccgag aagagccctt
661 tcttcttgtc cgtgaccctt tctgaccaaa acaatcaacg tgtccctcaa taccgtgcaa
721 ttctttggag aaaaacaggt acccagaaaa tatgccttcc ctacagtccc acaaaaactc
781 tttctgtgaa gtccatctta agtgccatga atctggacaa atttgagaaa ggccccaggg
841 aaatttttca tcctgaaata caaaaggact tgctggttct tgaagaacaa gagggctctg
901 tgaatttcaa gtttggggtt ctttttgcca aagatgggca gctcactgat gatgagatgt
961 tcagcaatga aattggaagc gagccttttc aaaaattttt aaatcttctg ggtgacacaa
1021 tcactctaaa gggctggacg ggctaccgtg gcggtctgga taccaaaaat gataccacag
1081 ggatacattc agtttatact gtgtaccaag ggcatgagat catgtttcat gtttccacca
1141 tgttgccata ttccaaagag aacaaacagc aggtggaaag gaaacgccac attggaaacg
1201 atatcgtcac cattgtgttc caagaaggag aggaatcttc tcctgccttt aagccttcca
1261 tgatccgctc ccactttaca catatttttg ccttagtgag atacaatcaa caaaatgaca
1321 attacaggct gaaaatattt tcagaagaga gcgtaccact ctttggccct cccttgccaa
1381 ctccaccagt gtttacagac caccaggaat tcagggactt tttgctagtg aaattaatta
1441 atggtgaaaa agccactttg gaaaccccaa catttgccca gaaacgtcgg cgtaccctgg
1501 atatgttgat tagatcttta caccaggatt tgatgccaga tttgcataag aacatgctta
1561 atagacgatc ttttagtgat gtcttaccag agtcacccaa gtcagcgcgg aagaaagagg
1621 aggcccgcca ggcggagttt gttagaatag ggcaggcact aaaactgaaa tccattgtga
1681 gaggggatgc tccatcaagc ttggcagctt cagggatctg taaaaaagag ccgtgggagc
1741 cccagtgttt ctgcagtaat ttccctcatg aagccgtgtg tgcagatccc tggggccagg
1801 ccttgctggt ttccactgat gctggcgtct tgctagtgga tgatgacctt ccatcagtgc
1861 ccgtgtttga cagaactctg ccagtgaagc aaatgcatgt gcttgagacc ctggaccttc
1921 tggttctcag agcagacaaa ggaaaagatg ctcgcctctt tgtcttcagg ctaagtgctc
1981 tgcaaaaggg ccttgagggg aagcaggctg ggaagagcag gtctgactgc agagaaaaca
2041 agttggagaa aacaaaaggc tgccacctgt atgctattaa cactcaccac agcagagagc
2101 tgaggattgt ggttgcaatt cggaataaac tgcttctgat cacaagaaaa cacaacaagc
2161 caagcggggt caccagcacc tcattgttat ctcccctgtc tgagtcacct gttgaagaat
2221 tccagtacat cagggagatc tgtctgtctg actctcccat ggtgatgacc ttagtggatg
2281 ggccagctga agagagtgac aatctcatct gtgtggctta tcgacaccaa tttgatgtgg
2341 tgaatgagag cacaggagaa gccttcaggc tgcaccacgt ggaggccaac agggttaatt
2401 ttgttgcagc tattgatgtg tacgaagatg gagaagctgg tttgctgttg tgttacaact
2461 acagttgcat ctataaaaag gtttgcccct ttaatggtgg ctcttttttg gttcaacctt
2521 ctgcgtcaga tttccagttc tgttggaacc aggctcccta tgcaattgtc tgtgctttcc
2581 cgtatctcct ggccttcacc accgactcca tggagatccg cctggtggtg aacgggaacc
2641 tggtccacac tgcagtcgtg ccgcagctgc agctggtggc ctccaggtcg gatatatact
2701 tcacagcaac tgcagctgtg aatgaggtct catctggagg cagctccaag ggggccagtg
2761 cccgaaattc tcctcagaca cccccgggcc gagatactcc agtatttcct tcttccctgg
2821 gggaaggtga aattcaatca aaaaatctgt acaagattcc acttagaaac ctcgtgggca
2881 gaagcatcga acgacctctg aagtcaccct tagtctccaa ggtcatcacc ccacccactc
2941 ccatcagtgt gggccttgct gccattccag tcacgcactc cttgtccctg tctcgcatgg
3001 agatcaaaga aatagcaagc aggacccgca gggaactact gggcctctcg gatgaaggtg
3061 gacccaagtc agaaggagcg ccaaaggcca aatcaaaacc ccggaagcgg ttagaagaaa
3121 gccaaggagg ccccaagcca ggggcagtga ggtcatctag cagtgacagg atcccatcag
3181 gctccttgga aagtgcttct acttccgaag ccaaccctga ggggcactca gccagctctg
3241 accaggaccc tgtggcagac agagagggca gcccggtctc cggcagcagc cccttccagc
3301 tcacggcttt ctccgatgaa gacattatag acttgaagta acagagttga atctcatttg
3361 ccatctttag ttttcttatg gaggtttata ctctttaaac agttctgatg taatttctca
3421 acaaaatgtg gcttttagcc tgtcagtgat ctattggacc aaaccttctg cacactcggc
3481 cagttccctc tccaatgtcc ggtgccatct ttcctgacct ttgtttcttt ctgttcagga
3541 accatcagtc cccctgtaat aaaggtggta gatttcattg aggttttaga ttgaaacttt
3601 gaataaatca aaaatactca ttctt
//