LOCUS AK293729 1746 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ57953 complete cds, highly similar to
Double-stranded RNA-binding protein Staufen homolog 2.
ACCESSION AK293729
VERSION AK293729.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1746)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1746
/clone="BRACE3000905"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488353"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 32..1204
/codon_start=1
/note="highly similar to Double-stranded RNA-binding
protein Staufen homolog 2"
/protein_id="BAH11582.1"
/transl_table=1
/translation="MVARPLHSTEGQPESLGKMFSVQLSLGEQTWESEGSSIKKAQQA
VANKALTESTLPKPVQKPPKSNVNNNPGSITPTVELNGLAMKRGEPAIYRPLDPKPFP
NYRANYNFRGMYNQRYHCPVPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQ
NEPIPERSPQNGESGKDMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKS
FVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIV
KAGPEYGQGMNPISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGT
GPNKKIAKKNAAEAMLLQLGYKASTNLQDQLEKTGENKGWSGPKPGFPEPTNNRKS"
BASE COUNT 587 a 375 c 375 g 409 t
ORIGIN
1 gttgcacagc ggcggccgga gcagacgcgg gatggtcgcg cgtcccctgc acagcacaga
61 ggggcagccg gagagcctgg gaaagatgtt ctcagtgcag ctgagtcttg gtgagcagac
121 atgggaatcc gaaggcagca gtataaagaa ggctcagcag gctgttgcca ataaagcttt
181 gactgaatct acgcttccca aaccagttca gaagccaccc aaaagtaatg ttaacaataa
241 cccaggcagt ataactccaa ctgtggaact gaatgggctt gctatgaaaa ggggagagcc
301 tgccatctac aggccattag atccaaagcc attcccaaat tatagagcta attacaactt
361 tcggggcatg tacaatcaga ggtatcattg cccagtgcct aagatctttt atgttcagct
421 cactgtagga aataatgaat tttttgggga aggaaagact cgacaagctg ctagacacaa
481 tgctgcaatg aaagccctcc aagcactgca gaatgaacct attccagaaa gatctcctca
541 gaatggtgaa tcaggaaagg atatggatga tgacaaagat gcaaataagt ctgagatcag
601 cttagtgttt gaaattgctc tgaagcgaaa tatgcctgtc agttttgagg ttattaaaga
661 aagtggacca ccacatatga aaagctttgt tactcgagtg tcagtaggag agttctctgc
721 agaaggagaa ggaaatagca aaaaactctc caagaagcgc gctgcgacca ccgtcttaca
781 ggagcttaaa aaacttccac ctcttcctgt ggtggaaaag ccaaaactat tttttaaaaa
841 acgccctaaa acaatagtaa aggccggacc agaatatggc caagggatga accctattag
901 ccgcctggcg caaattcaac aggccaaaaa ggaaaaggag ccggattatg ttttgctttc
961 agaaagagga atgcctcgac gtcgagaatt tgtgatgcag gtgaaggtag gcaatgaagt
1021 tgctacagga acaggaccta ataaaaagat agccaaaaaa aatgctgcag aagcaatgct
1081 gttacaactt ggttataaag catccactaa tcttcaggat caacttgaga agacagggga
1141 aaacaaagga tggagtggtc caaagcctgg gtttcctgaa ccaacaaata ataggaaatc
1201 ataactaatg gagtttttct gagaagaatc ataaccaaga agaacgatct ttattttacg
1261 agcaacattt taaccccact taaataaact aaaaattgaa gatgactcat tatcctcaca
1321 agctccaaaa ggaattcttc atttgtctcc tgatgtttat caagagatgg aagccagccg
1381 ccacaaagta atctctggca ctactctagg ctatttgtca cccaaagata tgaaccaacc
1441 ttcaagctct ttcttcagta tatctcccac atcgaatagt tcagctacaa ttgccaggga
1501 actccttatg aatggaacat cttctacagc tgaagccata ggtttaaaag gaagttctcc
1561 tactccccct tgttctccag tacaaccttc aaaacaactg gaatatttag caaggattca
1621 aggctttcag gtatgaatta aaagcaaaaa caaaaaacaa aacaattcat tagcctcaga
1681 ttcttcatct gtatacatca caaggctcat tcttgcctgc tagtatggcc tacatgccac
1741 ttacgt
//