LOCUS AK293726 3716 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61628 complete cds, highly similar to Homo
sapiens Cdc42 GTPase-activating protein (CDGAP), mRNA.
ACCESSION AK293726
VERSION AK293726.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3716)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3716
/clone="BRACE3000421"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488350"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 130..3429
/codon_start=1
/note="highly similar to Homo sapiens Cdc42
GTPase-activating protein (CDGAP), mRNA"
/protein_id="BAH11580.1"
/transl_table=1
/translation="MKNKGAKQKLKRKGAASAFGCDLTEYLESSGQDVPYVLKSCAEF
IETHGIVDGIYRLSGVTSNIQRLRQEFGSDQCPDLTREVYLQDIHCVGSLCKLYFREL
PNPLLTYELYEKFTEAVSHCPEEGQLARIQNVIQELPPSHYRTLEYLIRHLAHIASFS
SKTNMHARNLALVWAPNLLRSKEIEATGCNGDAAFLAVRVQQVVIEFILNHVDQIFNN
GAPGSLENDENRPIMKSLTLPALSLPMKLVSLEEAQARSLATNHPARKERRENSLPEI
VPPMGTLFHTVLELPDNKRKLSSKSKKWKSIFNLGRSGSDSKSKLSRNGSVFVRGQRL
SVEKATIRPAKSMDSLCSVPVEGKETKGNFNRTVTTGGFFIPATKMHSTGTGSSCDLT
KQEGEWGQEGMPPGAEGGFDVSSDRSHLQGAQARPPPEQLKVFRPVEDPESEQTAPKM
LGMFYTSNDSPSKSVFTSSLFQMEPSPRNQRKALNISEPFAVSVPLRVSAVISTNSTP
CRTPPKELQSLSSLEEFSFHGSESGGWPEEEKPLGAETSAASVPKKAGLEDAKAVPEA
PGTVECSKGLSQEPGAHLEEKKTPESSLSSQHLNELEKRPNPEKVVEEGREAGEMESS
TLQESPRARAEAVLLHEMDEDDLANALIWPEIQQELKIIESEEELSSLPPPALKTSPI
QPILESSLGPFIPSEPPGSLPCGSFPAPVSTPLEVWTRDPANQSTQGASTAASREKPE
PEQGLHPDLASLAPLEIVPFEKASPQATVEVGGPGNLSPPLPPAPPPPTPLEESTPVL
LSKGSPEREDSSRKLRTDLYIDQLKSQDSPEISSLCQGEEATPRHSDKQNSKNAASEG
KGCGFPSPTREVEIVSQEEEDVTHSVQEPSDCDEDDTVTDIAQHGLEMVEPWEEPQWV
TSPLHSPTLKDAHKAQVQGLQGHQLEKRLSHRPSLRQSHSLDSKPTVKSQWTLEVPSS
SSCANLETERNSDPFQPQAPRREITGWDEKALRSFREFSGLKGAEAPPNQKGPSGVQP
NPAQPVGPLRNLPKMILPPPWKAQRKKNQSKIPEPLSPHQWMPLHPACARDLPFLQNQ
ARLTCSPPRMQ"
BASE COUNT 957 a 1055 c 983 g 721 t
ORIGIN
1 tcttccatct tccgatgcgg ccccccagag ccgcggggca gccggtgatc tagcccggga
61 gcccatctta cagcggtgcc aagcagaggg gaggctgaga cggaggggca gcctctttgg
121 gactaactca tgaagaacaa gggtgctaag cagaagctga aacgaaaggg agccgccagc
181 gcgtttggct gtgacctgac ggagtatctg gaaagctcgg gacaggatgt tccatacgtt
241 ttgaagagct gtgcagaatt tatagagact cacggcatcg tggatggaat ctatcggctt
301 tcaggagtca cctcaaacat acaacggcta aggcaagagt ttggctcaga tcaatgtcca
361 gatctgacaa gggaagtgta cctccaggac atccactgtg tgggctcgct ttgcaagctc
421 tactttaggg agctgcccaa ccccctcctg acttatgagc tctatgagaa attcacggag
481 gcagtgtcgc attgccctga agaaggccaa ctggcccgaa tccaaaatgt tatccaggag
541 cttcctccat cccactatag gaccttggaa tacctgattc gacacctggc ccatatcgcc
601 tccttcagca gcaagaccaa catgcacgcc cggaacctgg ccctggtgtg ggcgccaaac
661 ctcctcaggt ctaaagaaat tgaagccact ggttgcaatg gagatgcagc cttccttgca
721 gtccgggtcc agcaggtggt gattgagttc atattgaatc atgtagatca aatctttaac
781 aacggtgcac ctgggtctct ggagaatgat gaaaaccggc ccatcatgaa gagcctgacc
841 ttgccagccc tctccctgcc catgaagctg gtgagccttg aggaagctca agcccgcagc
901 ctggccacta accatcctgc tcgcaaggaa aggagggaga acagcctgcc tgagattgtc
961 cctcccatgg gcaccctctt ccacactgtc cttgagttac cagacaacaa gcgaaagctc
1021 tccagtaaat caaagaagtg gaaatcaata tttaacctgg gacgttctgg atcagactcc
1081 aaatcaaaac tgagtagaaa tgggagtgta tttgtgagag gacagaggct ctcggtggaa
1141 aaggctacta tccgaccagc taaaagcatg gactcactat gttcagtgcc tgtggaagga
1201 aaagaaacca agggaaattt caatcgaaca gttaccaccg gtggattttt cattccagca
1261 acaaagatgc actccaccgg caccggcagc tcatgtgacc tcaccaagca ggagggcgaa
1321 tggggccagg aggggatgcc tcccggggct gagggtggct ttgatgtgag cagtgatcgc
1381 agccatctcc agggcgctca ggcccggccc ccaccggaac agctgaaggt tttccggcct
1441 gttgaggatc cggagagcga gcaaacagcc ccaaagatgt tgggtatgtt ctacacttcg
1501 aacgacagcc ctagcaaatc cgtcttcacc agcagcctct tccagatgga gccctcgccg
1561 cgtaaccagc gcaaggcgct gaacatctcc gagccctttg cggtatctgt gccgctccgc
1621 gtgtccgcag tcatcagcac caacagcacg ccgtgcagaa cacccccgaa ggagctgcag
1681 tctctttcca gcctggaaga gttttctttt catggatcag agagcggagg ctggccagaa
1741 gaagagaaac cgctgggagc tgagacttct gcagcttctg tacctaagaa ggcaggtctt
1801 gaggatgcca aggcagtacc tgaagcaccg gggacagtgg aatgcagcaa aggcctgtcc
1861 caggagccag gcgcccacct ggaggagaag aaaaccccag aaagctcctt gagctctcaa
1921 catttaaatg aattagagaa gaggccaaat ccggagaagg tggtggagga gggacgagag
1981 gctggtgaga tggagtccag caccctgcag gagagcccca gggccagagc cgaagctgtg
2041 cttctccatg agatggatga agatgatctg gccaatgccc tgatctggcc tgagattcaa
2101 caggagctga aaatcattga atctgaggag gagctctcat cgttgccacc tcctgctctg
2161 aagaccagcc caattcagcc tattctcgag tcgagtctgg ggccctttat tccctcagag
2221 cctcctggga gcttgccttg tggctccttc cctgctccag tctccacccc tctggaggtg
2281 tggactaggg atccagccaa tcagagcaca cagggggctt ccacagcagc cagcagagag
2341 aagccggaac ctgagcaggg cctgcaccca gacctcgcca gcctggctcc tctggaaata
2401 gttccttttg agaaggcatc tccacaagca acagtggaag taggaggccc aggcaatctg
2461 tctcctccac tcccacctgc tcctccccct ccaactcctc tggaggagtc aactccagtc
2521 ctgctttcaa agggcagccc ggaaagagaa gactcatcca ggaaattgag gacagatctc
2581 tacatagacc agctgaagtc ccaagacagc cctgagatct ctagcctctg tcagggagag
2641 gaggcaaccc caagacacag tgacaagcaa aattcaaaga atgctgcttc tgaggggaaa
2701 ggctgtggtt ttccaagccc aaccagggag gttgagatcg tctcacaaga agaggaggat
2761 gtaacccatt cagtacagga gccttcagac tgtgacgaag atgacactgt gacagacatt
2821 gcccagcatg gcctggagat ggtggagccc tgggaggaac cccagtgggt gacgagtccc
2881 cttcactctc ccaccctgaa agacgcgcac aaggcccagg tacagggcct tcagggtcac
2941 cagttggaga agaggctttc ccacaggccc agccttcgcc agagccattc tctagatagc
3001 aaacccacgg ttaaaagcca gtggactctc gaggttccct cctccagcag ctgtgctaat
3061 cttgaaacag agaggaattc tgaccctttt cagccccagg cacccaggag agagattact
3121 ggatgggatg agaaagccct gaggtccttc agagagttct ctggcctgaa aggggcagag
3181 gctcctccca accagaaggg accaagtggt gtgcaaccca acccagctca accagtggga
3241 ccactcagaa acctgccaaa gatgattctc cctcctccct ggaaagctca aaggaagaaa
3301 aaccaaagca agatcccgga gccattaagt cctcaccagt ggatgccact gcaccctgca
3361 tgtgcgaggg acctaccctt tctccagaac caggctcgtc taacctgctc tccacccagg
3421 atgcagtagt gcaatgcaga aagcgcatgt cagagacaga gccatctggg gacaaccttc
3481 tttcttcaaa actagagcga ccatctgggg gttctaagcc tttccacagg tcaaggccag
3541 gaagacctca gagcctaatc ttattcagtc ctcctttccc cattatggac cacctgcccc
3601 cttcatccac agtgacagat tccaaggtcc tgctgtcccc tatcagaagt cccacccaga
3661 cagtttcccc tggccttctt tgtggagagt tggcagaaaa cacatgggtc acacca
//