LOCUS AK293724 870 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56778 complete cds, highly similar to
Heparan-sulfate 6-O-sulfotransferase 1 (EC2.8.2.-).
ACCESSION AK293724
VERSION AK293724.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 870)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..870
/clone="BRACE3000150"
/clone_lib="BRACE3"
/db_xref="H-InvDB:HIT000488348"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 119..727
/codon_start=1
/note="highly similar to Heparan-sulfate
6-O-sulfotransferase 1 (EC2.8.2.-)"
/protein_id="BAG57153.1"
/transl_table=1
/translation="MCDGRTPTPEELPPCYEGTDWSGCTLQEFMDCPYNLANNRQVRM
LTDLSLVGCYNLSFIPEGKRAQLLLESAKKNLRGMAFFGLTEFQRKTQYLFERTFNLK
FIRPFMQYNSTRAGGVEVDEDTIRRIEELNDLDMQLYDYAKDLFQQRYQYKRQLERRE
QRLRSREERLLHRAKEALPREDADEPGRVPTEDYMSHIIEKW"
BASE COUNT 188 a 264 c 288 g 130 t
ORIGIN
1 cgcgctgcgc acgcccagga agttctacta catcaccctg ctacgagacc ccgtgtcccg
61 ctgcctgagc gagtggcggc atgtgcagag gggtgccacg tggaagacgt cgttgcatat
121 gtgtgatggg cgcacgccca cgcctgagga gctgccgccc tgctacgagg gcacggactg
181 gtcgggctgc acgctacagg agttcatgga ctgcccgtac aacctggcca acaaccgcca
241 ggtgcgcatg ctgaccgacc tgagcctggt gggctgctac aacctgtcct tcatccccga
301 gggcaagcgg gcccagctgc tgctcgagag cgccaagaag aacctgcggg gcatggcctt
361 cttcggcctg accgagttcc agcgcaagac gcagtacctg ttcgagcgga cgttcaacct
421 caagttcatc cggcccttca tgcagtacaa tagcacgcgg gcgggcggcg tggaggtgga
481 tgaagacacc atccggcgca tcgaggagct caacgacctg gacatgcagc tgtacgacta
541 cgccaaggac ctcttccagc agcgctacca gtacaagcgg cagctggagc gcagggagca
601 gcgcctgagg agccgcgagg agcgtctgct gcaccgggcc aaggaggcac tgccgcggga
661 ggatgccgac gagccgggcc gcgtgcccac cgaggactac atgagccaca tcattgagaa
721 gtggtagtgg cggtggtggc cacggggagg cctcttgggg ggtgtggggg ataaaacagg
781 acagacgaca ggtccaccca agactgtcaa gggatgagca tcccaaacct gctccacaga
841 ggtagctgcg tcctgaaaaa aaacagagca
//