LOCUS AK293701 1263 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ51778 complete cds, highly similar to
Bestrophin-1.
ACCESSION AK293701
VERSION AK293701.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1263)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1263
/clone="BRACE2045017"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488325"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 162..1151
/codon_start=1
/note="highly similar to Bestrophin-1"
/protein_id="BAH11574.1"
/transl_table=1
/translation="MSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKR
FPSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQ
SLLNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPG
HELDLVVPVFTFLQFFFYVGWLKVGLSRALLGWRHGQRGHGQQLPETRMQCQERKVSR
VESSQAWWRTPVIPATREAEAGESLEPGRRRLWWQSSSSTPLERMMMILRPTGLSTGI
CRCPCWLWMRCTRTCLGWSRTCTGISPSHSPPTQLLPPSSVEPPLWAPPSTSA"
BASE COUNT 261 a 361 c 380 g 261 t
ORIGIN
1 attgcgacag ctacatccag ctcatcccca tttccttcgt gctggggaaa ggtgcggact
61 gcagccagag aaactgaagt tagacgttag gcttctacgt gacgctggtc gtgacccgct
121 ggtggaacca gtacgagaac ctgccgtggc ccgaccgcct catgagcctg gtgtcgggct
181 tcgtcgaagg caaggacgag caaggccggc tgctgcggcg cacgctcatc cgctacgcca
241 acctgggcaa cgtgctcatc ctgcgcagcg tcagcaccgc agtctacaag cgcttcccca
301 gcgcccagca cctggtgcaa gcaggcttta tgactccggc agaacacaag cagttggaga
361 aactgagcct accacacaac atgttctggg tgccctgggt gtggtttgcc aacctgtcaa
421 tgaaggcgtg gcttggaggt cgaatccggg accctatcct gctccagagc ctgctgaacg
481 agatgaacac cttgcgtact cagtgtggac acctgtatgc ctacgactgg attagtatcc
541 cactggtgta tacacaggtg gtgactgtgg cggtgtacag cttcttcctg acttgtctag
601 ttgggcggca gtttctgaac ccagccaagg cctaccctgg ccatgagctg gacctcgttg
661 tgcccgtctt cacgttcctg cagttcttct tctatgttgg ctggctgaag gtgggcctct
721 ccagggccct gctgggctgg aggcatggcc agaggggtca tggccagcag ctgcctgaga
781 cgaggatgca gtgtcaggaa aggaaggtct cacgggtaga aagcagccag gcgtggtggc
841 gcacacctgt aatcccagct actcgggagg ctgaggcagg agaatcgctt gaacccggga
901 ggcggaggtt gtggtggcag agcagctcat caaccccttt ggagaggatg atgatgattt
961 tgagaccaac tggattgtcg acaggaattt gcaggtgtcc ctgttggctg tggatgagat
1021 gcaccaggac ctgcctcgga tggagccgga catgtactgg aataagcccg agccacagcc
1081 cccctacaca gctgcttccg cccagttccg tcgagcctcc tttatgggct ccaccttcaa
1141 catcagcctg aacaaagagg agatggagtt ccagcccaat caggaggacg aggaggatgc
1201 tcacgctggc atcattggcc gcttcctagg cctgcagtcc catgatcacc atcctcccag
1261 ggc
//