LOCUS AK293678 1765 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55830 complete cds, highly similar to
Semaphorin-3B precursor.
ACCESSION AK293678
VERSION AK293678.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1765)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1765
/clone="BRACE2040523"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488302"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 375..1595
/codon_start=1
/note="highly similar to Semaphorin-3B precursor"
/protein_id="BAG57120.1"
/transl_table=1
/translation="MNDVRRAFLGPFAHKEGPMHQWVSYQGRVPYPRPGMCPSKTFGT
FSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAADRVAAADGHY
DVLFIGTDVGTVLKVISVPKGSRPSAEGLLLEELHVFEDSAAVTSMQISSKRHQLYVA
SRSAVAQIALHRCAAHGRVCTECCLARDPYCAWDGVACTRFQPSAKRRFRRQDVRNGD
PSTLCSGDSSRPALLEHKVFGVEGSSAFLECEPRSLQARVEWTFQRAGVTAHTQVLAE
ERTERTARGLLLRRLRRRDSGVYLCAAVEQGFTQPLRRLSLHVLSATQAERLARAEEA
APAAPPGPKLWYRDFLQLVEPGGGGSANSLRMCRPQPALQSLPLESRRKGRNRRTHAP
EPRAERGPRSATHW"
BASE COUNT 304 a 572 c 593 g 296 t
ORIGIN
1 atggtgctag aggttgggtg gtcagacact gtgatcccgg gtgctgtgcc cgcactacgg
61 gaaggggaag cagcgcgtgg gtctcgcatc aggaggcaag gccaggaccc gctgacccat
121 gcctcctgcc gcggtcagag cccaagtttg tcaagaacga cgtgggcggc cagcgcagcc
181 tggtcaacaa gtggacgacg ttcctgaagg cgcggctggt gtgctcggtg cccggcgtcg
241 agggcgacac ccacttcgat cagctccagg atgtgtttct gttgtcctcg cgggaccacc
301 ggaccccgct gctctatgcc gtcttctcca cgtccagcag catcttccag ggctctgcgg
361 tgtgcgtgta cagcatgaac gacgtgcgcc gggccttctt gggacccttt gcacacaagg
421 aggggcccat gcaccagtgg gtgtcatacc agggtcgcgt cccctacccg cggccaggca
481 tgtgccccag caagaccttt ggcaccttca gttccaccaa ggacttccca gacgatgtca
541 tccagtttgc gcggaaccac cccctcatgt acaactctgt cctgcccact ggggggcgcc
601 ctcttttcct acaagttgga gccaattaca ccttcactca aattgccgcg gaccgggttg
661 cagccgctga cggacactat gacgtcctct tcattggcac agacgttggc acggtgctga
721 aggtgatctc ggtccccaag ggcagtaggc ccagcgcaga ggggctgctc ctggaggagc
781 tgcacgtgtt tgaggactcg gccgctgtca ccagcatgca aatttcttcc aagaggcacc
841 agctgtacgt agcctcgcgg agcgcggtgg cccagatcgc gttgcaccgc tgcgctgccc
901 acggccgcgt ctgcaccgaa tgctgtctgg cgcgtgaccc ctactgcgcc tgggacgggg
961 tcgcgtgcac gcgcttccag cccagtgcca agaggcggtt ccggcggcaa gacgtaagga
1021 atggcgaccc cagcacgttg tgctccggag actcgtctcg tcccgcgctg ctggaacaca
1081 aggtgttcgg cgtggagggc agcagcgcct ttctggagtg tgagccccgc tcgctgcagg
1141 cgcgcgtgga gtggactttc cagcgcgcag gggtgacagc ccacacccag gtgctggcag
1201 aggagcgcac cgagcgcacc gcccggggac tactgctgcg caggctgcgg cgccgggact
1261 cgggcgtgta cttgtgcgcc gccgtcgagc agggctttac gcaaccgctg cgtcgcctgt
1321 cgctgcacgt gttgagtgct acgcaggccg aacgactggc gcgggccgag gaggctgcgc
1381 ccgccgcgcc gccgggcccc aaactctggt accgggactt tctgcagctg gtggagccgg
1441 gcggaggtgg cagcgcgaac tccctgcgca tgtgccgccc gcagcctgcg ctgcagtcac
1501 tgcccctgga gtcgcggaga aagggccgta accggaggac ccacgcccct gagcctcgcg
1561 ctgagcgggg gccgcgcagc gcaacgcact ggtgaccaga ctgtccccac gccgggaacc
1621 aagcaggaga cgacaggcga gagaggagcc agacagaccc tgaaaagaag gacgggttgg
1681 ggccgggcac attgggggtc accggccgat ggagacacca accgacaggc cctggctgag
1741 ggcagctgcg cgggcttatt tatta
//