LOCUS AK293671 1412 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51799 complete cds, highly similar to Sorting
nexin-2.
ACCESSION AK293671
VERSION AK293671.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1412)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1412
/clone="BRACE2039057"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488295"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 181..1389
/codon_start=1
/note="highly similar to Sorting nexin-2"
/protein_id="BAG57115.1"
/transl_table=1
/translation="MSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMA
YRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKV
KVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQALS
GAGILRMVNKAADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHVSVEALVCHRK
ELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELL
SDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKREAEAKMMVANKPDKIQQAKNEIR
EWEAKVQQGERDFEQISKTIRKEVGRFEKERVKDFKTVIIKYLESLVQTQQQLIKYWE
AFLPEAKAIA"
BASE COUNT 484 a 248 c 322 g 358 t
ORIGIN
1 actctatgaa aaatgtggac tgtccagaga agcaaaaatg tggttctttc tggctaagcc
61 acagaagaag tttctttgga cagccctgaa agggaaccta tcctatcctc ggaaccttct
121 cctgcagtca cacctgtcac tcctactaca ctcattgctc ctagaattga atcaaagagt
181 atgtctgctc ccgtgatctt tgatagatcc agggaagaga ttgaagaaga agcaaatgga
241 gacatttttg acatagaaat tggtgtatca gatccagaaa aagttggtga tggcatgaat
301 gcctatatgg catatagagt aacaacaaag acatctcttt ccatgttcag taagagtgaa
361 ttttcagtga aaagaagatt cagcgacttt cttggtttgc acagcaaatt agcaagcaaa
421 tatttacatg ttggttatat tgtgccacca gctccagaaa agagtatagt agggatgacc
481 aaggtcaaag tgggtaaaga agactcatca tccactgagt ttgtagaaaa acggagagca
541 gctcttgaaa ggtatcttca aagaacagta aaacatccaa ctttactaca ggatcctgat
601 ttaaggcagt tcttggaaag ttcagagctg cctagagcag ttaatacaca ggctctgagt
661 ggagcaggaa tattgaggat ggtgaacaag gctgccgacg ctgtcaacaa aatgacaatc
721 aagatgaatg aatcggatgc atggtttgaa gaaaagcagc agcaatttga gaatctggat
781 cagcaactta ggaaacttca tgtcagtgtt gaagccttgg tctgtcatag aaaagaactt
841 tcagccaaca cagctgcctt tgctaaaagt gctgccatgt taggtaattc tgaggatcat
901 actgctttat ctagagcttt gtctcagctt gcagaggttg aggagaagat agaccagtta
961 catcaagaac aagcttttgc tgacttttat atgttttcag aactacttag tgactacatt
1021 cgtcttattg ctgcagtgaa aggtgtgttt gaccatcgaa tgaagtgctg gcagaaatgg
1081 gaagatgctc aaattacttt gctcaaaaaa cgtgaagctg aagcaaaaat gatggttgct
1141 aacaaaccag ataaaataca gcaagctaaa aatgaaataa gagagtggga ggcgaaagtg
1201 caacaggggg aaagagattt tgaacagata tctaaaacga ttcgaaaaga agtgggaaga
1261 tttgagaaag aacgagtgaa ggattttaaa accgttatca tcaagtactt agaatcacta
1321 gttcaaacac aacaacagct gataaaatac tgggaagcat tcctacctga agccaaagcc
1381 attgcctagc aataagattg ttgccgttag ga
//