LOCUS AK293658 1390 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52621 complete cds, moderately similar to
Homo sapiens neurochondrin (NCDN), transcript variant 3, mRNA.
ACCESSION AK293658
VERSION AK293658.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1390)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1390
/clone="BRACE2036809"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488282"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 185..715
/codon_start=1
/note="moderately similar to Homo sapiens neurochondrin
(NCDN), transcript variant 3, mRNA"
/protein_id="BAG57106.1"
/transl_table=1
/translation="MPHSFRYLAALQGTPASRGFFAAAILFLSQSHVARATPGSDQAV
LALSPEYEGIWADLQELWYLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSEPQL
CQARDGGRLSGCPGGAGAGQPAVPGGHEAAGGRGDGQPLPHGCLGAVPVRALRGVHRG
LTQGRAEREGGRRHLP"
BASE COUNT 240 a 436 c 431 g 283 t
ORIGIN
1 tattggccca ttttacaagt aaagaaacag acccagaaaa gttaattacc caaggtcaca
61 cagtgagcat ctaaggcagg gtttcaacgc aggcagtctg attccaggct gtgccctggc
121 tcctgcatgt gtctacacag aggactaggg aagggtctga cacagcagct ggcctgtccg
181 attcatgccc cactccttcc gttaccttgc agctcttcag ggaacaccag catcccgagg
241 gttcttcgca gctgccatcc tcttcctatc acagtcccac gtggcgcggg ccaccccggg
301 ctcagaccag gcagtgctag ccctgtcccc tgagtatgag ggcatctggg ccgacctgca
361 ggagctctgg tacctgggca tgcaggcctt caccggctgt gtgcctctgc tgccctggct
421 ggcccccgct gccctgcgct cccgctggcc gcaggagctg ctccagctgc taggcagtga
481 gccccaactc tgtcaagccc gagatggtgg ccgcctatca gggtgtcctg gtggagctgg
541 cgcgggccaa ccggctgtgc cgggaggcca tgaggctgca ggcgggcgag gagacggcca
601 gccactaccg catggctgcc ttggagcagt gcctgtcaga gccctgaggg gtgtccaccg
661 gggactgacc caggggcggg cagagaggga aggagggagg aggcatcttc cctgaagccc
721 ccaatctggc ccccccctcc ccagacttcc tccccaaaac accccagctt tctggctttt
781 ctgagggcaa gggcatggtg cccacccctc aagtgtaagg aactgcgttc cgcccctcag
841 gcccccatgg gggcagggat cggcttggaa atcaacgtgg ttgtccccgc caggccgggg
901 aaggttggag cagcccccag ggaggggggc actaggtgtc attgtgcccg atgtctggct
961 cccctgcagg agggaggctc cagggtaaga cagggctggc aggagcagac tgcctcagcc
1021 catgtgccct gccggccagg gcgtgggctc ccctcggctg tggtgcctcc tctggccccc
1081 caggtccacg tcctttaaat tggccctttg gctcttgccc ttggctccct tgggcagaca
1141 gcaggcttag gccattgata tcgcagttct tcctatcagc ttcagtgacc cagggtctga
1201 actgcctcca tcctagggca acctggggca gacaggcctg gtggggggtg gggaaacctc
1261 cttccacctg agcttgcttg aagggaccca gagtctttgg gcccagatct ttaaaccttt
1321 gtgtcgtgtt gcagcagagt gacgatgggg gttggggggt tatttatttt gcctgtcctt
1381 atccctgctt
//