LOCUS AK293644 1652 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53304 complete cds, highly similar to Rab11
family-interacting protein 3.
ACCESSION AK293644
VERSION AK293644.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1652)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1652
/clone="BRACE2034094"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488268"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 4..1479
/codon_start=1
/note="highly similar to Rab11 family-interacting protein
3"
/protein_id="BAG57098.1"
/transl_table=1
/translation="MGSESTYSECETFTDEDTSTLVHPELQPEGDADSAGGSAVPSEC
LDAMEEPDHGALLLLPGRPHPHGQSVITVIGGEEHFEDYGEGSEAELSPETLCNGQLG
CSDPAFLTPSTDPLAAKLHSILTDEAFEFYCSQCHKQINRLEDLSARLSDLEMNSPTK
RLSSKKVARYLHQSGALTMEALEDPSPELMEGPEEDIADKVVFLERRVLELEKDTAAT
GEQHSRLRQENLQLVHRANALEEQLKEQELRACEMVLEETRRQKELLCKMEREKSIEI
ENLQTRLQQLDEENSELRSCTPCLKANIERLEEEKQKLLDEIESLTLRLSEEQENKRR
MGDRLSHERHQFQRDKEATQELIEDLRKQLEHLQLLKLEAEQRRGRSSSMGLQEYHSR
ARESELEQEVRRLKQDNRNLKEQNEELNGQIITLSIQGAKSLFSTAFSESLAAEISSV
SRDELMEAIQKQEEINFRLQDYIDRIIVAIMETNPSILEVK"
BASE COUNT 401 a 471 c 540 g 240 t
ORIGIN
1 tacatgggct ccgagagcac ctacagtgag tgtgagacct tcacggacga ggacaccagc
61 accctggtgc accctgagct gcaacctgaa ggggacgcag acagtgccgg cggctcggcc
121 gtgccctctg agtgcctgga cgccatggag gagcccgacc atggtgccct gctgctgctc
181 ccaggcaggc ctcaccccca tggccagtct gtcatcacgg tgatcggggg cgaggagcac
241 tttgaggact acggtgaagg cagtgaggcg gagctgtccc cagagaccct atgcaacggg
301 cagctgggct gcagtgaccc cgctttcctc acgcccagca ctgaccctct tgccgcaaag
361 ctgcacagca tcctcactga tgaggcgttt gagttttact gtagccagtg ccacaaacaa
421 atcaaccgcc ttgaggatct ttctgcccgc ctgagtgatc ttgaaatgaa tagtccgaca
481 aagcggctct ccagcaagaa ggtggcaagg tacctgcacc agtcaggggc cctgaccatg
541 gaggccctgg aggacccttc ccccgagctc atggagggcc cagaggagga cattgctgac
601 aaggttgtct tcctggaaag gcgtgtgctg gagctggaaa aggacacggc agccaccggt
661 gagcaacaca gccgcctgag gcaggagaac ctgcagctgg tgcacagagc aaacgccctg
721 gaggagcagc tgaaggagca ggagctgaga gcctgcgaga tggtcctgga agagacccgg
781 cgtcagaagg agctcctgtg caagatggag agggagaaga gcattgagat cgagaacctg
841 cagaccaggc tacagcaact ggacgaggag aacagtgaac tccggtcctg cacgccctgt
901 ctgaaggcca acattgagcg tctggaggag gagaagcaga agctgttgga tgagatagag
961 tcgctgacgc tgcggctcag tgaagagcag gagaacaaga ggagaatggg ggacaggctg
1021 agtcacgaga ggcaccagtt ccagagggac aaggaggcca cccaggagct gatcgaggac
1081 ctccgaaagc agctggagca cctgcagctc ctcaagctgg aggccgagca gcggcggggc
1141 cgcagcagca gcatgggcct gcaggagtac cacagccgcg cccgggagag cgagctggag
1201 caggaggtcc gcaggctgaa gcaggacaac cgcaacctga aggagcagaa cgaggagctg
1261 aacgggcaga tcattaccct cagcatccag ggcgccaaga gcctcttctc cacagccttc
1321 tctgagtccc tggctgcaga gatcagctcc gtctcccgag atgagctcat ggaggcgatt
1381 cagaagcagg aggagatcaa cttccgcctg caggactaca tcgacaggat catcgtggcc
1441 atcatggaga ccaacccgtc catcctggag gtcaagtaga ggcaggaagg tccagcctga
1501 gctggattcg ggactccaac accctggagt ggttccgtca gaccatgagg agccaagacc
1561 agcaggtccc acagccgaca gtgcccagag catgcaggga accctcgtgc agctgagctg
1621 gggccgccaa agaccggggc tgccaaaggg gc
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