LOCUS AK293619 1855 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59238 complete cds, highly similar to SNW
domain-containing protein 1.
ACCESSION AK293619
VERSION AK293619.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1855)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1855
/clone="BRACE2028315"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488243"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 30..1745
/codon_start=1
/note="highly similar to SNW domain-containing protein 1"
/protein_id="BAG57078.1"
/transl_table=1
/translation="MALTSFLPAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPY
GYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKMSNALAIQVDSEGKIKYDAIA
RQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVA
AAMPVRAADKLAPVQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKI
PRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQ
TVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKARER
RAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI
ALGVPNPRTSNEVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRP
SKNLDKDMYGDDLEARIKTNRCQAIQLNFSVYTGESNVVHSFFPFSLDLFPTRSFLVQ
TVDREAEKDQFSLRKILLVWTSFWKKPNSMVALKDPQIAAAPRNTSMKARRGGRNRHR
SLQSE"
BASE COUNT 610 a 378 c 468 g 399 t
ORIGIN
1 gtcgctcgcg ctggaagaag cggaagaaga tggcgctcac cagcttttta cctgcaccta
61 ctcagctatc tcaggaccag cttgaggctg aagaaaaggc aagatcccag agatcacggc
121 agacctcact ggtctcctcc cgaagagaac ctcccccgta cggataccgg aaaggctgga
181 tacctcggtt attagaggat tttggagatg gaggtgcttt tccagagatc catgtggccc
241 agtatccact ggatatggga cgaaagaaaa aaatgtcgaa tgcgctggcc attcaggtgg
301 attctgaagg aaaaattaaa tatgatgcaa ttgctcgaca aggacagtca aaagacaagg
361 tcatttatag caaatacact gacctggttc caaaggaggt tatgaatgca gatgatccag
421 acctgcaaag gcccgatgaa gaagctatta aagagataac agaaaagaca agagtagcct
481 tagaaaaatc tgtatcacag aaggtcgccg cagccatgcc agttcgagca gctgacaaat
541 tggctcctgt tcagtatatc cgatacacac catctcagca aggagtggca ttcaactctg
601 gagctaaaca gagggttatt cggatggtag aaatgcagaa agatccaatg gagcctccaa
661 ggttcaagat taataagaaa attccccggg gaccaccttc tcctcctgcg cctgtcatgc
721 attctcctag ccgaaagatg actgtaaagg aacaacaaga gtggaagatt cctccttgta
781 tttctaactg gaaaaatgca aagggttata caattccatt agacaaacgt ctggctgctg
841 atggaagagg actacagaca gtacacataa atgaaaattt cgccaaattg gcagaagccc
901 tctacattgc tgatcgaaag gctcgtgaag ctgtggaaat gcgtgcccaa gtagagagaa
961 aaatggctca gaaagaaaag gaaaaacatg aagagaaact tagagaaatg gcccagaaag
1021 ccagggagag aagagctggg atcaaaactc atgtggaaaa agaggatggg gaggcacgtg
1081 agagggatga aatccggcat gacaggcgaa aagagagaca gcatgaccgg aatctttcca
1141 gggcagctcc tgataagagg tcgaaacttc agagaaatga aaatcgggat atcagtgaag
1201 ttattgctct cggtgttcct aatcctcgga cttccaatga agttcagtat gaccaaaggc
1261 tcttcaacca atccaagggt atggacagtg gatttgcagg tggagaagat gaaatttata
1321 atgtttatga tcaagcctgg agaggtggta aagatatggc ccagagtatt tataggccca
1381 gtaaaaatct ggacaaggac atgtatggtg atgacctaga agccagaata aagaccaaca
1441 ggtgccaagc catacaactc aatttcagtg tttacactgg tgaaagcaac gtagttcata
1501 gttttttccc cttttcctta gatttgttcc cgacaaggag ttttctggtt cagaccgtag
1561 acagagaggc cgagaaggac cagttcagtt tgaggaagat ccttttggtt tggacaagtt
1621 tttggaagaa gccaaacagc atggtggctc taaaagaccc tcagatagca gccgccccaa
1681 ggaacacgag catgaaggca agaagaggag gaaggaatag gcacaggtct ctccaaagtg
1741 aatgaactct tacccataac cctaatgatg caagtcatat gggggaacac tttgtaaatg
1801 gtcaggataa aaaccaaatc tgggtgccag atcccagcac tactttttat tactg
//