LOCUS AK293578 1406 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52586 complete cds, highly similar to Homo
sapiens transmembrane protein 49 (TMEM49), mRNA.
ACCESSION AK293578
VERSION AK293578.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1406)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1406
/clone="BRACE2021676"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488202"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 328..1146
/codon_start=1
/note="highly similar to Homo sapiens transmembrane
protein 49 (TMEM49), mRNA"
/protein_id="BAG57048.1"
/transl_table=1
/translation="MDLKGPHIASVTLAAYECNSVNFPEPPYPDQIICPDEEGTEGTI
SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAES
AQDFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI
GKAIIKMHIQKIFVIITFSKHIVEQMVAFIGAVPGIGPSLQKPFQEYLEAQRQKLHHK
SEMGTPQGENWLSWMFEKLVVVMVCYFILSIINSMAQSYAKRIQQRLNSEEKTK"
BASE COUNT 402 a 288 c 341 g 375 t
ORIGIN
1 gtgagcgggt tccggttgtc tggagcccag cggcgggtgt gagagtccgt aaggagcagc
61 ttccaggatc ctgagatccg gagcagccgg ggtcggagcg gctcctcaag agttactgat
121 ctatgaaatg gcagagaatg gaaaaaattg tgaccagaga cgtgtagcaa tgaacaagga
181 acatcataat ggaaatttca cagacccctc ttcagtgaat gaaaagaaga ggagggagcg
241 ggaagaaagg cagaatattg tcctgtggag acagccgctc attaccttgc agtatttttc
301 tctggaaatc cttgtaatct tgaaggaatg gacctcaaag gtccacatat agcctcagtt
361 acattagctg cttatgaatg caattcagtt aattttcccg aaccacccta tcctgatcag
421 attatttgtc cagatgaaga gggcactgaa ggaaccattt ctttgtggag tatcatctca
481 aaagttagga ttgaagcctg catgtggggt atcggtacag caatcggaga gctgcctcca
541 tatttcatgg ccagagcagc tcgcctctca ggtgctgaac cagatgatga agagtatcag
601 gaatttgaag agatgctgga acatgcagag tctgcacaag actttgcctc ccgggccaaa
661 ctggcagttc aaaaactagt acagaaagtt ggattttttg gaattttggc ctgtgcttca
721 attccaaatc ctttatttga tctggctgga ataacgtgtg gacactttct ggtacctttt
781 tggaccttct ttggtgcaac cctaattgga aaagcaataa taaaaatgca tatccagaaa
841 atttttgtta taataacatt cagcaagcac atagtggagc aaatggtggc tttcattggt
901 gctgtccccg gcataggtcc atctctgcag aagccatttc aggagtacct ggaggctcaa
961 cggcagaagc ttcaccacaa aagcgaaatg ggcacaccac agggagaaaa ctggttgtcc
1021 tggatgtttg aaaagttggt cgttgtcatg gtgtgttact tcatcctatc tatcattaac
1081 tccatggcac aaagttatgc caaacgaatc cagcagcggt tgaactcaga ggagaaaact
1141 aaataagtag agaaagtttt aaactgcaga aattggagtg gatgggttct gccttaaatt
1201 gggaggactc caagccggga aggaaaattc ccttttccaa cctgtatcaa tttttacaac
1261 ttttttcctg aaagcagttt agtccatact ttgcactgac atactttttc cttctgtgct
1321 aaggtaaggt atccaccctc gatgcaatcc accttgtgtt ttcttagggt ggaatgtgat
1381 gttcagcagc aaacttgcaa cagact
//