LOCUS AK293559 1300 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ53027 complete cds, highly similar to Mus
musculus Parkinson disease 7 domain containing 1 (Pddc1), mRNA.
ACCESSION AK293559
VERSION AK293559.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1300)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1300
/clone="BRACE2017858"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488183"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 99..611
/codon_start=1
/note="highly similar to Mus musculus Parkinson disease 7
domain containing 1 (Pddc1), mRNA"
/protein_id="BAH11535.1"
/transl_table=1
/translation="MEFVDVTESNARWVQDFRLKAYASPAKLESIDGARYHALLIPSC
PGALTDLASSGSLARILQHFHSESKPICAVGHGVAALCCATNEDRSWVFDSYSLTGPS
VCELVRAPGFARLPLVVEDFVKDSGACFSASEPDAVHVVLDRHLVTGQNASSTVPAVQ
NLLFLCGSRK"
BASE COUNT 224 a 408 c 399 g 269 t
ORIGIN
1 gcagacccag cgccgagccc gagccatggc gtccgagcgg ctccctaaca ggcccgcctg
61 tctgctcgtg gccagcggcg ccgccgaagg ggaaagccat ggaatttgtg gatgtgactg
121 agagcaatgc acgctgggtg caagacttcc gcctcaaggc ttacgccagc cccgccaagc
181 tcgagtccat cgatggtgcc cggtaccatg ccctcctgat ccccagctgt cctggggccc
241 tgaccgacct ggccagcagt ggctccctgg cccgtatcct gcagcacttc cactctgaga
301 gcaaacccat ctgcgccgtc ggccacggtg tcgccgccct gtgctgtgcc accaacgagg
361 acagatcctg ggtgttcgac agctacagcc tgacagggcc ctctgtgtgt gagctcgtca
421 gggcccccgg cttcgcccgc ctgccgctcg tggtggagga cttcgtgaag gattcgggcg
481 cctgcttcag tgcaagcgag cctgacgctg tccacgtcgt gctggaccgc cacctggtca
541 caggccagaa tgccagctcc actgtcccgg ccgtgcagaa cctgctcttc ctctgtggca
601 gccggaaatg aacctgctgg gtagatgcac cccctgagac agcccaggtg tctccagagg
661 cagccccgtc tcaggcttca gggaccccgc ctcttccctc ctgacaaggg ccctggatgg
721 cagcctggtc tggccctgat gggattgttg gaggcctcct ggaatcagct ctgagggggt
781 gtcggctctc ctggagggtc caaaccccca tcctcctgca tgttctctgg taggaggcag
841 agaaaagacc ccacgtgcct ggagagctgt gctagctgct aggtggtcct cgggaattcc
901 aggctgggtt ttctagggag gactggttgt cacgtgtggt cactgttgac tagacagagt
961 cggctcgggg gtcctctgtg tgggtttgcc ctgctgtggc ctgtctgcca cccaccacct
1021 ctttcactgt tggtgggggc cttgagggga gggcccagcc ggcgggagct ggctcagaac
1081 tttggccaaa ggtgaacgga attttttagg agcagcagcc tcctgcccca aggccgaccg
1141 gcactggcag cactttcctg ttgaagaaat cttcctggcg tgtggtttca aagtgtaagc
1201 acctcagtga tgcaccctgt cctaagcatt gagaggcacg tttacttgtg aatatgagac
1261 catgagattc tcaatgatag gaaagtgctg tcccccacgg
//