LOCUS AK293555 1714 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50448 complete cds, highly similar to
Vacuolar protein sorting-associated protein 45.
ACCESSION AK293555
VERSION AK293555.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1714)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1714
/clone="BRACE2017474"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488179"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 52..1356
/codon_start=1
/note="highly similar to Vacuolar protein
sorting-associated protein 45"
/protein_id="BAH11533.1"
/transl_table=1
/translation="MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEI
LQKEVYLFERIDSQNREIMKHLKAICFLRPTKENVDYIIQELRRPKYTIYFIYFSNVI
SKSDVKSLAEADEQEVVAEVQQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQ
WTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNI
KNLMEDFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSER
NLLEVSEVEQELACQNDHSSALQNIKRLLQNPKVTEFDATRLVMLYALHYERHSSNSL
PGLMMDLRNKGVSEKYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVEN
VYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRIASCL"
BASE COUNT 535 a 328 c 394 g 457 t
ORIGIN
1 agccagaaaa gggggcggga agggctgtag ggtacttgtc aattcgccgc catgaacgtg
61 gtttttgctg tgaagcagta catttccaaa atgatagagg acagcgggcc tggtatgaaa
121 gtacttctca tggataaaga gacgactggc atagtgagta tggtatacac acaatcggag
181 attctacaga aggaagtgta cctctttgaa cgcattgatt ctcaaaatcg agagatcatg
241 aaacacctga aggcaatttg ttttcttcga cctacaaagg agaatgtgga ttatattatt
301 caggagctcc gaagacccaa atacactata tatttcattt atttcagtaa tgtgatcagc
361 aagagtgacg tgaagtcatt ggctgaagct gatgaacagg aagttgtggc tgaggttcag
421 caagtgataa ctaaagaata tgaactgttt gaattccgtc ggacagaggt tcctccattg
481 ctccttattt tagatcgctg tgatgatgcc atcaccccat tgctaaacca gtggacatat
541 caggccatgg tccacgaact actaggcata aacaacaatc ggattgatct ttccagagtg
601 ccgggaatca gtaaagactt aagagaagtg gtcctatctg ctgaaaatga tgaattctat
661 gctaataata tgtacctgaa ctttgctgag attggtagca atataaagaa tctcatggaa
721 gattttcaga agaagaaacc aaaagaacag caaaaactag aatcaatagc agacatgaag
781 gcgtttgttg agaattatcc acagttcaag aaaatgtctg ggactgtttc aaagcatgtg
841 acagtggttg gagaactgtc tcgattggtc agtgaacgga atctgctgga ggtttcagag
901 gttgagcaag aactggcctg tcaaaatgac cattctagtg ctctccagaa tataaaaagg
961 cttctgcaga accccaaagt gacagagttt gatgctaccc gcctggtgat gctttatgct
1021 ttacattatg agcgacacag cagcaatagc ctgccaggac taatgatgga cctcaggaat
1081 aaaggtgttt ctgagaagta tcgaaagctc gtgtctgcag ttgttgaata tggtggtaaa
1141 cgagtcagag gaagtgacct cttcagcccc aaagatgctg tggctatcac caaacaattc
1201 ctcaaaggac tgaagggagt agaaaatgta tatacacagc atcaaccttt cctacatgaa
1261 accctggatc atctcatcaa aggaaggctt aaggaaaacc tatatcctta tttaggcccc
1321 agcacactca gagacagaat tgcctcttgt ctctgataaa ggcaagcaac tttttcattt
1381 ggtgaggaaa tggagctata tgatcatgca ttccagaatc agtcaattca aaaaggaagt
1441 acttttcatg tttatacaaa tgtagtagaa tcttgttgct acagcttatt ttttgtttct
1501 gtgaagcagc agtccttttt cattggcctt ttttcctgca gtaaatgctc ataagaactg
1561 taccatttac ctcaggatat cattgtgttt gtaattggag gagccaccta tgaagaggct
1621 ctaacagttt ataacctgaa ccgcaccact cctggagtga ggattgtcct gggaggcacc
1681 acagtgcaca acacgaaaag tttcctagag gaag
//