LOCUS AK293545 1761 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50447 complete cds, highly similar to
Squalene synthetase (EC 2.5.1.21).
ACCESSION AK293545
VERSION AK293545.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1761)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1761
/clone="BRACE2015333"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488169"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 469..1530
/codon_start=1
/note="highly similar to Squalene synthetase (EC
2.5.1.21)"
/protein_id="BAH11529.1"
/transl_table=1
/translation="MRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPD
WRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQ
EWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQ
QGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRN
QSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQ
YMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSW
QYLTTLSQVTEDYVQTGEH"
BASE COUNT 460 a 391 c 466 g 444 t
ORIGIN
1 aattgatggc gggggagccg gatgtcagtg gatggaaaat tattacgagg aaacacaggg
61 gtgtgcgttc ttgctgaagg caggccagag ttatcagaca tcacctgagg gatggagggg
121 gatgtggaac ctaatcggct gtctagggtg atcagatact gaagttgggg gattctggtc
181 aaatcaattt agcaggattc ttggtaaaat tgggcgatgc aaagacagat gcgttgagta
241 caaagtccag gccttattgg gaagaggatt tcagcggagc ccgagtagag tttggtctag
301 ggagactctg tcactgggag gacgagcgag ccgctcggaa gtgcgctggg ttctcttagc
361 ggccagtggg ttctggactc gctcagcagc agcctgaaaa cttgctacaa gtatctcaat
421 cagaccagtc gcagtttcgc agctgttatc caggcgctgg atggggaaat gcgcaacgca
481 gtgtgcatat tttatctggt tctccgagct ctggacacac tggaagatga catgaccatc
541 agtgtggaaa agaaggtccc gctgttacac aactttcact ctttccttta ccaaccagac
601 tggcggttca tggagagcaa ggagaaggat cgccaggtgc tggaggactt cccaacgatc
661 tcccttgagt ttagaaatct ggctgagaaa taccaaacag tgattgccga catttgccgg
721 agaatgggca ttgggatggc agagtttttg gataagcatg tgacctctga acaggagtgg
781 gacaagtact gccactatgt tgctgggctg gtcggaattg gcctttcccg tcttttctca
841 gcctcagagt ttgaagaccc cttagttggt gaagatacag aacgtgccaa ctctatgggc
901 ctgtttctgc agaaaacaaa catcatccgt gactatctgg aagaccagca aggaggaaga
961 gagttctggc ctcaagaggt ttggagcagg tatgttaaga agttagggga ttttgctaag
1021 ccggagaata ttgacttggc cgtgcagtgc ctgaatgaac ttataaccaa tgcactgcac
1081 cacatcccag atgtcatcac ctacctttcg agactcagaa accagagtgt gtttaacttc
1141 tgtgctattc cacaggtgat ggccattgcc actttggctg cctgttataa taaccagcag
1201 gtgttcaaag gggcagtgaa gattcggaaa gggcaagcag tgaccctgat gatggatgcc
1261 accaatatgc cagctgtcaa agccatcata tatcagtata tggaagagat ttatcataga
1321 atccccgact cagacccatc ttctagcaaa acaaggcaga tcatctccac catccggacg
1381 cagaatcttc ccaactgtca gctgatttcc cgaagccact actcccccat ctacctgtcg
1441 tttgtcatgc ttttggctgc cctgagctgg cagtacctga ccactctctc ccaggtaaca
1501 gaagactatg ttcagactgg agaacactga tcccaaattt gtccatagct gaagtccacc
1561 ataaagtgga tttacttttt ttctttaagg atggatgttg tgttctcttt atttttttcc
1621 tactacttta atccctaaaa gaacgctgtg tggctgggac ctttaggaaa gtgaaatgca
1681 ggtgagaaga acctaaacat gaaaggaaag ggtgcctcat cccagcaacc tgtccttgtg
1741 ggtgatgatc actgcgctgc t
//