LOCUS AK293542 1485 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56491 complete cds, highly similar to
DNA-repair protein XRCC1.
ACCESSION AK293542
VERSION AK293542.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1485)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1485
/clone="BRACE2015048"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488166"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 99..1301
/codon_start=1
/note="highly similar to DNA-repair protein XRCC1"
/protein_id="BAG57023.1"
/transl_table=1
/translation="MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTIS
VVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSG
SNPNRVRMFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPFGLSFVRFHSPPDKDEAEA
PSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQA
SSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLP
APTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPF
RSELRDKALELGAKYRPDWTRDSTHLICAFANTPKLPQKVPPQHTPDQNQAHSGSWTQ
LTPEAPNP"
BASE COUNT 359 a 473 c 416 g 237 t
ORIGIN
1 ccagcgcagg gcgcaccccg ctccctccca ctctccctgc ccctcggacc ccatactcta
61 cctcatcctt ctggccaggc gaagcccacg acgttgacat gccggagatc cgcctccgcc
121 atgtcgtgtc ctgcagcagc caggactcga ctcactgtgc agaaaatctt ctcaaggcag
181 acacttaccg aaaatggcgg gcagccaagg caggcgagaa gaccatctct gtggtcctac
241 agttggagaa ggaggagcag atacacagtg tggacattgg gaatgatggc tcagctttcg
301 tggaggtgct ggtgggcagt tcagctggag gcgctgggga gcaagactat gaggtccttc
361 tggtcacctc atctttcatg tccccttccg agagccgcag tggctcaaac cccaaccgcg
421 ttcgcatgtt tgggcctgac aagctggtcc gggcagccgc cgagaagcgc tgggaccggg
481 tcaaaattgt ttgcagccag ccctacagca aggactcccc ctttggcttg agttttgtac
541 ggtttcatag ccccccagac aaagatgagg cagaggcccc gtcccagaag gtgacagtga
601 ccaagcttgg ccagttccgt gtgaaggagg aggatgagag cgccaactct ctgaggccgg
661 gggctctctt cttcagccgg atcaacaaga catccccagt cacagccagc gacccagcag
721 gacctagcta tgcagctgct accctccagg cttctagtgc tgcctcctca gcctctccag
781 tctccagggc cataggcagc acctccaagc cccaggagtc tcccaaaggg aagaggaagt
841 tggatttgaa ccaagaagaa aagaagaccc ccagcaaacc accagcccag ctgtcgccat
901 ctgttcccaa gagacctaaa ttgccagctc caactcgtac cccagccaca gccccagtcc
961 ctgcccgagc acagggggca gtgacaggca aaccccgagg agaaggcacc gagcccagac
1021 gaccccgagc tggcccagag gagctgggga agatccttca gggtgtggta gtggtgctga
1081 gtggcttcca gaaccccttc cgctccgagc tgcgagataa ggccctagag cttggggcca
1141 agtatcggcc agactggacc cgggacagca cgcacctcat ctgtgccttt gccaacaccc
1201 ccaagcttcc tcagaaggta cccccccaac acaccccaga ccaaaaccaa gcccactcag
1261 gcagctggac ccagctcacc ccagaagccc ccaacccctg aagagaccaa agcagcctca
1321 ccagtgctcc aggaagatat agacattgag ggggtacagt cagaaggaca ggacaatggg
1381 gcggaagatt ctggggacac agaggatgag ctgaggaggg tggcagagca gaaggaacac
1441 agactgcccc ctggccagga ggagaatggg gaagacccgt atgca
//