LOCUS AK293524 1580 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55784 complete cds, highly similar to Homo
sapiens zinc finger protein 187 (ZNF187), transcript variant 3,
mRNA.
ACCESSION AK293524
VERSION AK293524.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1580)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1580
/clone="BRACE2012485"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488148"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 198..1430
/codon_start=1
/note="highly similar to Homo sapiens zinc finger protein
187 (ZNF187), transcript variant 3, mRNA"
/protein_id="BAG57006.1"
/transl_table=1
/translation="MRVMKLCQQWLQPETHTKEQILELLVLEQFLIILPKELQARVQE
HHPESREDVVVVLEDLQLDLGETGQQVDPDQPKKQKILVEEMAPLKGVQEQQVRHECE
VTKPEKEKGEETRIENGKLIVVTDSCGRVESSGKISEPMEAHNEGSNLERHQAKPKEK
IEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSREKGHQCHE
CGKAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCG
KNFRRSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKA
FSLTSDLIRHHRIHTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFR
QRSGLFQHQRYHHKDKLA"
BASE COUNT 454 a 353 c 430 g 343 t
ORIGIN
1 gagctaagac gctgtttcag agcgtttggg tcctctgagg ccccttgacc aggtgagcgg
61 accctggagc tgggccccgg gctggggcgg aactgcggcc taggggccta gggagcagct
121 gcttcccggc gggtgcagag aatcttccct cgaccgaggg ggcggggtcc gtagcggagg
181 tgtcggccct ggggcctatg agagtgatga agctctgtca acagtggcta cagcccgaga
241 cccataccaa ggagcagatc ctggagctgc tggtgctgga gcagtttctg atcatcctgc
301 ctaaggagct ccaggcccgg gtgcaggagc atcacccaga gagcagggag gacgtggttg
361 ttgttctgga ggatttgcag ctggatcttg gagaaacagg acaacaggtg gacccagacc
421 agccaaagaa acaaaaaata cttgtggagg agatggcccc tctgaaagga gtacaggaac
481 agcaggttcg gcatgagtgt gaagttacaa agcctgagaa agagaagggt gaggagacaa
541 ggattgagaa tgggaagctt attgtagtaa cagactcttg tggaagagta gagtcatctg
601 ggaaaatatc tgaacccatg gaggctcata atgagggctc taacttggaa aggcatcagg
661 ccaagcccaa agagaagatt gagtataaat gctcagaacg tgagcagaga ttcatccagc
721 acttggacct gattgaacat gcgagtacac acacgggaaa gaaactctgc gagtctgatg
781 tgtgtcagag ttccagtctt acaggacata agaaagtcct ctctagagag aaaggtcatc
841 agtgtcatga gtgtgggaaa gcctttcaga ggagttcaca cctcgtcaga catcagaaaa
901 tccatcttgg tgagaagcct tatcagtgca atgagtgtgg caaagtcttt agccagaatg
961 caggcctttt ggaacatctc agaattcata ctggagagaa accttatcta tgtatccatt
1021 gtggaaaaaa ttttaggcgc agctctcacc ttaatcgaca tcagagaatt cacagtcagg
1081 aggagccctg tgagtgcaag gagtgtggaa aaacctttag tcaggcctta ctcctcaccc
1141 accatcagag aatccatagt cactccaaaa gccatcaatg taacgagtgt ggaaaagctt
1201 tcagtttgac ctcagacctt attcgacacc acagaattca tactggagaa aaacctttca
1261 agtgtaacat atgccagaaa gccttccgac taaactcaca ccttgctcag catgtaagaa
1321 tccacaatga agaaaaaccc tatcagtgta gtgaatgtgg agaagccttc aggcaaaggt
1381 caggtctttt tcaacatcag agatatcacc acaaagacaa actggcttga tgaggtgttc
1441 tctccttgta gaacatcaga gaaggcacat tgactagcaa acagcacttt aggaaaagtc
1501 accgtagccc actgtggcat cagaaaattc ttgggggctg agttggaggc tccctgcctc
1561 tattctctct cctttgcttt
//