LOCUS AK293520 2033 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55534 complete cds, highly similar to
4-trimethylaminobutyraldehyde dehydrogenase (EC 1.2.1.47).
ACCESSION AK293520
VERSION AK293520.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2033)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2033
/clone="BRACE2012071"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488144"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 112..1566
/codon_start=1
/note="highly similar to 4-trimethylaminobutyraldehyde
dehydrogenase (EC 1.2.1.47)"
/protein_id="BAG57002.1"
/transl_table=1
/translation="MSTGTFVVSQPLNYRGGARVEPADASGRVIATFTCSGEKEVNLA
VQNAKAAFKIWSQKSGMERCRILLEAARIIREREDEIATMECINNGKSIFEARLDIDI
SWQCLEYYAGLAASMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIASWKSAPA
LACGNAMVFKPSPFTPVSALLLAEIYSEAGVPPGLFNVVQGGAATGQFLCQHPDVAKV
SFTGSVPTGMKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMNNAVKGALMANFLTQGQ
VCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVLGFVK
VAKEQGAKVLCGGDIYVPEDPKLKDGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSF
DTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGTCFINNYNVSPVELPFGGY
KKSGFGRENGRVTIEYYSQLKTVCVEMGDVESAF"
BASE COUNT 513 a 455 c 513 g 552 t
ORIGIN
1 cccccgtcag cctctgccgc ggagctgcgt ccgccactca tgtttctccg agccggcctg
61 gccgcgctct ccccgcttct tcgcagtctt cggccctctc ctgtcgccgc catgagcact
121 ggcaccttcg tcgtgtcgca gccgctcaat taccgcggcg gggcccgcgt ggagccggcg
181 gacgcctccg gccgagtgat agctactttc acatgttcag gagaaaagga agtaaatttg
241 gctgttcaaa atgcaaaggc tgcttttaaa atatggagtc aaaaatctgg catggagcgt
301 tgccgaatcc ttttggaggc tgccaggata ataagggaac gggaggatga aattgctact
361 atggagtgca tcaacaatgg caagtccatc tttgaggccc gcttggacat tgacatttcc
421 tggcagtgcc tggagtatta tgcgggcttg gctgcatcca tggctggtga acacatccag
481 ctcccaggtg gatcgtttgg ttataccaga agagaaccac ttggggtatg tgtgggaatt
541 ggagcatgga actacccctt tcagattgcc tcttggaagt cggctccagc attagcctgt
601 ggtaatgcca tggtctttaa accttctccc tttacacctg tttctgcatt gctactggct
661 gaaatctaca gtgaggctgg tgtacctcct gggctcttca atgtggtgca gggaggggct
721 gccacaggcc agtttctgtg tcagcatccc gatgtggcca aagtctcctt cactggaagt
781 gtgcccactg gcatgaagat catggagatg tcagctaaag gaatcaaacc tgttaccttg
841 gaacttggag gcaaatctcc actcatcatc ttctcagact gtgatatgaa caatgctgta
901 aagggggcgc tgatggccaa cttcctcaca caaggccagg tttgctgtaa tggcacaaga
961 gtatttgtgc agaaagaaat tcttgataaa tttacagagg aagtggtgaa acagacccaa
1021 aggattaaaa ttggagatcc ccttctggaa gatacaagga tgggtccact catcaaccga
1081 ccacacctgg agcgagtcct tgggtttgtc aaagtggcaa aggagcaggg tgctaaagtg
1141 ttatgtggtg gagatatata tgtacctgaa gatcccaaat taaaggatgg atattacatg
1201 agaccttgtg tattaactaa ttgcagagac gacatgacct gtgtgaagga agagatcttt
1261 gggcctgtta tgtccatttt atcatttgac actgaagctg aggttctaga aagagccaat
1321 gataccactt ttggactagc agctggcgtc tttaccaggg acatccaacg ggctcataga
1381 gtggtagctg agcttcaggc tgggacgtgc ttcattaaca actataacgt cagcccagtg
1441 gagttgccct ttggtggata taagaagtca ggatttggca gagagaacgg ccgtgtgaca
1501 atcgaatatt attcacagct gaagactgtg tgtgtggaga tgggtgatgt ggaatctgct
1561 ttttgaaaac ctgcagtgaa acctattgac atggccacgc tgtggaatga tgtgaattgg
1621 ccctgtttac agaggcagta caactgaatg ttattttaca tccagaattt tggcgttcag
1681 tataagagaa tggttcatgt tactctttct ctctccatca gcttcctcac tggaaatgtg
1741 cattaagtgc cttgtagata ctaatcaaga aagctgtgat tctcctcaaa gcgtattttt
1801 gtgaaatctt ttaagagcca gtaacatact tctagagaac aggaaaagag actaggataa
1861 tacatcttcc acacatttgg cccactgata atgttaattc tctggcgtat ttcaaagaac
1921 ttgttcctgg ctgatccaag tgcagtggta tttacaacta attgatcaca accagtttgt
1981 agatttcttt gttccttctc cattcccact gcttcacttg cctagtcttg aag
//