LOCUS AK293490 934 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57501 complete cds, highly similar to
Alpha-internexin.
ACCESSION AK293490
VERSION AK293490.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 934)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..934
/clone="BRACE2007322"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000488114"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 177..563
/codon_start=1
/note="highly similar to Alpha-internexin"
/protein_id="BAG56977.1"
/transl_table=1
/translation="MARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTSGLSIS
GLNPLPNPSYLLPPRILSATTSKVSSTGLSLKKEEEEEEASKVASKKTSQIGESFEEI
LEETVISTKKTEKSNIEETTISSQKI"
BASE COUNT 296 a 210 c 214 g 214 t
ORIGIN
1 acgagtatcg gcgccagctg caggcgcgca ccatcgagat cgagggcctg cgcggggcca
61 acgagtcctt ggagaggcag atcctggagc tggaggagcg gcacagtgcc gaggtagctg
121 gctaccagga tagcattggg cagctggaga atgatctgag gaacaccaag agtgagatgg
181 cacgccacct tcgggaatac caggacttgc tcaatgtcaa aatggctctt gacattgaga
241 tagcagctta caggaaactg ctggaaggcg aggagacacg ttttagcacc agtgggttaa
301 gcatttcggg gctgaatcca cttcccaatc caagttacct gctcccacct agaatcctca
361 gtgctacaac ctccaaagtc tcatccactg ggctatcact taagaaagag gaggaggagg
421 aggaggcatc taaggtagcc tctaagaaaa cctcccagat aggggaaagt tttgaagaaa
481 tattagagga gacagtaata tctactaaga aaaccgagaa atcaaatata gaagaaacca
541 ccatttcaag ccaaaaaata taattccatt gctttgaaaa agttaatgct taagagggaa
601 tgatatgcat ttgacttgtt aaacagccta ttccttaact ataacacctg ccaccactat
661 aaaatgtctt caaggcttca gtctcatatt tagtattgaa tacttacatt ctctaataag
721 aaaaccaccc cttagattga agtaaactgc agtcctggag caatcacaga tgagttatct
781 aagaatacag ctttctgacc ttcagctcac gcttcacagt gatcgatgat tcaggtgcag
841 aggaagtaca aactaaggtg ctaaatctgc gatcatcgtc atttgctgtg aactgaaatt
901 aaaactattc atgctaccca gccattaccc agct
//